Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2574

Experiment: Nalidixic 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.05 mg/ml
2,658,881	+		Ga0059261_2572	0.61	+2.1
2,659,085	-		Ga0059261_2572	0.82	-0.2
2,659,085	-		Ga0059261_2572	0.82	-0.6
2,659,202	+				-0.7
2,659,202	+				+0.2
2,659,202	+				-0.0
2,659,202	+				+0.1
2,659,203	-				-1.6
2,659,203	-				+0.0
2,659,203	-				+0.3
2,659,203	-				-0.9
2,659,237	+				+0.9
2,659,237	+				-0.1
2,659,238	-				-0.0
2,659,238	-				+1.5
2,659,238	-				+0.0
2,659,258	+				-1.0
2,659,258	+				-0.2
2,659,258	+				-1.9
2,659,258	+				-1.0
2,659,258	+				-0.2
2,659,258	+				-0.0
2,659,258	+				+0.5
2,659,258	+				-0.1
2,659,259	-				-0.4
2,659,259	-				-0.3
2,659,259	-				-0.7
2,659,259	-				+1.5
2,659,259	-				+0.6
2,659,259	-				-0.3
2,659,259	-				-0.7
2,659,259	-				-0.1
2,659,290	+				+0.6
2,659,290	+				+0.3
2,659,290	+				+0.7
2,659,290	+				+0.1
2,659,291	-				+1.4
2,659,333	+				-0.3
2,659,333	+				-0.0
2,659,333	+				+1.5
2,659,333	+				+0.3
2,659,333	+				-0.1
2,659,333	+				+0.6
2,659,333	+				-0.4
2,659,334	-				+2.3
2,659,334	-				+0.5
2,659,334	-				+0.1
2,659,336	+				-0.5
2,659,336	+				+0.1
2,659,336	+				-0.1
2,659,336	+				+0.6
2,659,336	+				-1.2
2,659,337	-				+0.3
2,659,337	-				+0.2
2,659,398	+				-0.2
2,659,430	+				-0.3
2,659,430	+				+0.3
2,659,430	+				-0.5
2,659,430	+				-0.1
2,659,431	-				+0.9
2,659,431	-				-0.0
2,659,431	-				-0.6
2,659,431	-				+0.5
2,659,431	-				+2.5
2,659,447	-				+0.7
2,659,478	+				+0.1
2,659,478	+				+0.6
2,659,478	+				+0.4
2,659,479	-				-0.4
2,659,479	-				+0.1
2,659,479	-				-0.1
2,659,549	-		Ga0059261_2573	0.24	-0.5
2,659,582	+		Ga0059261_2573	0.32	+0.6
2,659,582	+		Ga0059261_2573	0.32	-0.2
2,659,582	+		Ga0059261_2573	0.32	+0.8
2,659,582	+		Ga0059261_2573	0.32	-0.9
2,659,582	+		Ga0059261_2573	0.32	-0.7
2,659,582	+		Ga0059261_2573	0.32	+0.6
2,659,582	+		Ga0059261_2573	0.32	-0.6
2,659,582	+		Ga0059261_2573	0.32	-0.5
2,659,582	+		Ga0059261_2573	0.32	-2.3
2,659,583	-		Ga0059261_2573	0.32	+0.2
2,659,583	-		Ga0059261_2573	0.32	-0.7
2,659,583	-		Ga0059261_2573	0.32	-0.1
2,659,583	-		Ga0059261_2573	0.32	+0.1
2,659,583	-		Ga0059261_2573	0.32	+0.1
2,659,583	-		Ga0059261_2573	0.32	+0.7
2,659,595	+		Ga0059261_2573	0.35	-1.1
2,659,595	+		Ga0059261_2573	0.35	-0.0
2,659,595	+		Ga0059261_2573	0.35	+0.0
2,659,596	-		Ga0059261_2573	0.35	-0.1
2,659,652	+		Ga0059261_2573	0.48	-0.4
2,659,652	+		Ga0059261_2573	0.48	+0.2
2,659,652	+		Ga0059261_2573	0.48	+0.4
2,659,652	+		Ga0059261_2573	0.48	+0.5
2,659,653	-		Ga0059261_2573	0.48	+1.1
2,659,653	-		Ga0059261_2573	0.48	+0.3
2,659,653	-		Ga0059261_2573	0.48	+0.7
2,659,653	-		Ga0059261_2573	0.48	+1.2
2,659,809	+		Ga0059261_2573	0.85	+0.9
2,659,809	+		Ga0059261_2573	0.85	+1.0
2,659,809	+		Ga0059261_2573	0.85	+0.8
2,659,809	+		Ga0059261_2573	0.85	+0.1
2,659,810	-		Ga0059261_2573	0.85	-1.4
2,659,810	-		Ga0059261_2573	0.85	+0.7
2,659,810	-		Ga0059261_2573	0.85	+0.4
2,659,810	-		Ga0059261_2573	0.85	+1.5
2,659,810	-		Ga0059261_2573	0.85	-0.9
2,659,810	-		Ga0059261_2573	0.85	+0.5
2,659,810	-		Ga0059261_2573	0.85	-0.1
2,659,828	+		Ga0059261_2573	0.89	-1.3
2,659,828	+				+2.9
2,659,829	-		Ga0059261_2573	0.90	+0.5
2,659,829	-		Ga0059261_2573	0.90	-0.7
2,659,829	-		Ga0059261_2573	0.90	+0.3
2,659,845	+				+0.1
2,659,845	+				+0.5
2,659,846	-				-0.5
2,659,846	-				+0.1
2,660,177	-		Ga0059261_2574	0.15	-0.2
2,660,222	+		Ga0059261_2574	0.18	+0.8
2,660,222	+		Ga0059261_2574	0.18	-0.4
2,660,222	+		Ga0059261_2574	0.18	-0.4
2,660,223	-		Ga0059261_2574	0.18	-0.6
2,660,225	+		Ga0059261_2574	0.18	+0.2
2,660,225	+		Ga0059261_2574	0.18	-0.3
2,660,225	+		Ga0059261_2574	0.18	-0.4
2,660,226	-		Ga0059261_2574	0.18	+1.2
2,660,226	-		Ga0059261_2574	0.18	+0.3
2,660,290	+		Ga0059261_2574	0.21	+0.2
2,660,290	+		Ga0059261_2574	0.21	-0.2
2,660,290	+		Ga0059261_2574	0.21	-0.1
2,660,290	+		Ga0059261_2574	0.21	-0.8
2,660,291	-		Ga0059261_2574	0.21	+0.4
2,660,291	-		Ga0059261_2574	0.21	+0.0
2,660,291	-		Ga0059261_2574	0.21	+0.3
2,660,291	-				-1.7
2,660,291	-		Ga0059261_2574	0.21	-2.3
2,660,291	-		Ga0059261_2574	0.21	+0.3
2,660,314	+		Ga0059261_2574	0.22	-0.4
2,660,314	+		Ga0059261_2574	0.22	-0.5
2,660,387	+		Ga0059261_2574	0.26	+0.0
2,660,387	+		Ga0059261_2574	0.26	+1.0
2,660,388	-		Ga0059261_2574	0.26	+0.6
2,660,516	+		Ga0059261_2574	0.32	-0.4
2,660,516	+		Ga0059261_2574	0.32	+0.9
2,660,516	+		Ga0059261_2574	0.32	+0.7
2,660,517	-		Ga0059261_2574	0.32	+0.1
2,660,517	-		Ga0059261_2574	0.32	-1.4
2,660,517	-		Ga0059261_2574	0.32	-0.4
2,660,517	-		Ga0059261_2574	0.32	-0.6
2,660,570	+		Ga0059261_2574	0.35	+1.2
2,660,570	+		Ga0059261_2574	0.35	-0.7
2,660,647	+				+1.9
2,660,647	+		Ga0059261_2574	0.39	+0.4
2,660,648	-		Ga0059261_2574	0.39	+0.5
2,660,648	-		Ga0059261_2574	0.39	+0.8
2,660,648	-		Ga0059261_2574	0.39	-0.6
2,660,648	-		Ga0059261_2574	0.39	+0.1
2,660,648	-		Ga0059261_2574	0.39	-0.9
2,660,733	+		Ga0059261_2574	0.43	-0.6
2,660,734	-		Ga0059261_2574	0.43	-1.0
2,660,765	+		Ga0059261_2574	0.45	-0.7
2,660,765	+		Ga0059261_2574	0.45	-0.4
2,660,765	+		Ga0059261_2574	0.45	+0.5
2,660,765	+		Ga0059261_2574	0.45	-0.9
2,660,766	-		Ga0059261_2574	0.45	-0.7
2,660,766	-		Ga0059261_2574	0.45	+0.4
2,660,766	-		Ga0059261_2574	0.45	-0.0
2,660,766	-		Ga0059261_2574	0.45	+0.4
2,660,766	-				-0.1
2,660,766	-		Ga0059261_2574	0.45	+1.4
2,660,766	-		Ga0059261_2574	0.45	-0.7
2,661,068	+		Ga0059261_2574	0.60	+0.3
2,661,068	+		Ga0059261_2574	0.60	-0.3
2,661,225	+		Ga0059261_2574	0.68	-0.8
2,661,225	+		Ga0059261_2574	0.68	+0.3
2,661,225	+		Ga0059261_2574	0.68	-0.3
2,661,225	+		Ga0059261_2574	0.68	-0.5
2,661,226	-		Ga0059261_2574	0.68	+0.1
2,661,226	-		Ga0059261_2574	0.68	+0.4
2,661,226	-		Ga0059261_2574	0.68	+0.2
2,661,227	+		Ga0059261_2574	0.68	-0.7
2,661,227	+		Ga0059261_2574	0.68	-0.2
2,661,228	-		Ga0059261_2574	0.68	-0.2
2,661,228	-		Ga0059261_2574	0.68	-0.7
2,661,228	-		Ga0059261_2574	0.68	-0.7
2,661,260	-		Ga0059261_2574	0.70	-0.5
2,661,260	-		Ga0059261_2574	0.70	+0.2
2,661,404	+		Ga0059261_2574	0.77	-0.0
2,661,404	+		Ga0059261_2574	0.77	+0.3
2,661,404	+		Ga0059261_2574	0.77	-0.4
2,661,404	+		Ga0059261_2574	0.77	+0.1
2,661,404	+		Ga0059261_2574	0.77	-0.1
2,661,405	-		Ga0059261_2574	0.77	-0.1
2,661,405	-		Ga0059261_2574	0.77	-1.1
2,661,405	-		Ga0059261_2574	0.77	-1.1
2,661,405	-		Ga0059261_2574	0.77	-1.1
2,661,440	+		Ga0059261_2574	0.79	-0.6
2,661,440	+		Ga0059261_2574	0.79	+0.0
2,661,440	+		Ga0059261_2574	0.79	+0.4
2,661,440	+		Ga0059261_2574	0.79	+0.2
2,661,440	+		Ga0059261_2574	0.79	+0.2
2,661,440	+		Ga0059261_2574	0.79	-0.7
2,661,441	-		Ga0059261_2574	0.79	-0.3
2,661,441	-		Ga0059261_2574	0.79	+0.1
2,661,441	-		Ga0059261_2574	0.79	-1.7
2,661,441	-		Ga0059261_2574	0.79	-0.9
2,661,441	-		Ga0059261_2574	0.79	+0.9
2,661,441	-		Ga0059261_2574	0.79	-0.2
2,661,441	-		Ga0059261_2574	0.79	-0.1
2,661,441	-		Ga0059261_2574	0.79	+0.0
2,661,441	-		Ga0059261_2574	0.79	-0.2
2,661,441	-		Ga0059261_2574	0.79	-0.7
2,661,441	-		Ga0059261_2574	0.79	+0.4
2,661,533	+		Ga0059261_2574	0.84	-0.4
2,661,533	+		Ga0059261_2574	0.84	+0.1
2,661,533	+		Ga0059261_2574	0.84	-0.2
2,661,533	+		Ga0059261_2574	0.84	+0.5
2,661,533	+		Ga0059261_2574	0.84	+0.7
2,661,534	-		Ga0059261_2574	0.84	+0.6
2,661,534	-		Ga0059261_2574	0.84	+0.1
2,661,534	-		Ga0059261_2574	0.84	+0.4
2,661,545	+		Ga0059261_2574	0.84	+0.0
2,661,623	+		Ga0059261_2574	0.88	-0.6
2,661,623	+		Ga0059261_2574	0.88	-0.1
2,661,623	+		Ga0059261_2574	0.88	-0.3
2,661,624	-		Ga0059261_2574	0.88	-0.5
2,661,624	-		Ga0059261_2574	0.88	+0.0
2,661,624	-		Ga0059261_2574	0.88	+0.6
2,661,624	-		Ga0059261_2574	0.88	+0.4
2,661,662	+				+0.1
2,661,662	+				+0.4
2,661,663	-				+0.5
2,661,663	-				+0.1
2,661,663	-				-0.2
2,661,663	-				+0.3
2,661,668	+				-0.4
2,661,669	-				+0.6
2,661,669	-				+0.0
2,661,669	-				-0.6
2,661,669	-				+0.1
2,661,669	-				-1.5
2,661,698	+				-0.3
2,661,698	+				-0.1
2,661,698	+				-0.1
2,661,698	+				-0.0
2,661,699	-				-0.5
2,661,699	-				+0.9
2,661,872	+				+0.3
2,661,872	+				+0.2
2,661,873	-				-0.1
2,661,873	-				+0.7
2,661,873	-				-1.3
2,661,950	+				-0.5
2,661,950	+				-0.4
2,661,950	+				+0.3
2,661,950	+				+0.1
2,661,950	+				-0.1
2,661,950	+				+0.6
2,661,950	+				-0.1
2,661,951	-				-0.2
2,661,951	-				+0.5
2,661,951	-				+0.3
2,661,951	-				+0.2
2,661,951	-				-0.1
2,661,951	-				+0.5
2,661,951	-				-0.7
2,661,951	-				+0.5
2,661,951	-				-1.0
2,661,951	-				-0.2
2,662,130	+		Ga0059261_2575	0.10	+0.1
2,662,130	+		Ga0059261_2575	0.10	-0.6
2,662,130	+		Ga0059261_2575	0.10	-0.5
2,662,131	-		Ga0059261_2575	0.11	-0.1
2,662,228	+		Ga0059261_2575	0.16	-0.0
2,662,229	-		Ga0059261_2575	0.16	-0.1
2,662,229	-		Ga0059261_2575	0.16	+1.1
2,662,229	-		Ga0059261_2575	0.16	-0.3
2,662,229	-		Ga0059261_2575	0.16	-0.1
2,662,417	-		Ga0059261_2575	0.27	+0.2
2,662,417	-		Ga0059261_2575	0.27	-0.3