Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2378

Experiment: Nalidixic 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.05 mg/ml
2,475,541	+				+0.0
2,475,541	+				-0.1
2,475,542	-				+0.4
2,475,542	-				-0.6
2,475,542	-				-0.5
2,475,542	-				-0.0
2,475,749	+		Ga0059261_2377	0.24	-0.4
2,475,749	+		Ga0059261_2377	0.24	-1.1
2,475,750	-		Ga0059261_2377	0.24	-0.0
2,475,750	-				-1.1
2,475,750	-		Ga0059261_2377	0.24	-0.8
2,475,772	+		Ga0059261_2377	0.27	+1.6
2,475,772	+				+0.3
2,475,772	+		Ga0059261_2377	0.27	-0.5
2,475,772	+		Ga0059261_2377	0.27	-0.1
2,475,772	+		Ga0059261_2377	0.27	+1.0
2,475,772	+		Ga0059261_2377	0.27	+1.0
2,475,773	-		Ga0059261_2377	0.27	+0.9
2,475,773	-		Ga0059261_2377	0.27	-0.4
2,475,773	-		Ga0059261_2377	0.27	+1.2
2,475,773	-		Ga0059261_2377	0.27	-0.6
2,475,773	-		Ga0059261_2377	0.27	+0.2
2,475,773	-		Ga0059261_2377	0.27	-0.5
2,475,773	-		Ga0059261_2377	0.27	-0.3
2,475,773	-		Ga0059261_2377	0.27	-0.7
2,475,836	+		Ga0059261_2377	0.34	+0.0
2,475,836	+		Ga0059261_2377	0.34	-1.4
2,475,836	+		Ga0059261_2377	0.34	-0.1
2,475,836	+		Ga0059261_2377	0.34	+0.3
2,475,837	-		Ga0059261_2377	0.34	+0.2
2,475,837	-		Ga0059261_2377	0.34	+1.3
2,475,837	-		Ga0059261_2377	0.34	+1.3
2,475,837	-		Ga0059261_2377	0.34	+0.8
2,475,837	-		Ga0059261_2377	0.34	-0.6
2,476,015	+		Ga0059261_2377	0.53	+1.7
2,476,015	+		Ga0059261_2377	0.53	-1.4
2,476,015	+		Ga0059261_2377	0.53	+0.2
2,476,015	+		Ga0059261_2377	0.53	-0.1
2,476,015	+		Ga0059261_2377	0.53	+0.2
2,476,016	-		Ga0059261_2377	0.53	+0.3
2,476,016	-		Ga0059261_2377	0.53	+0.5
2,476,016	-		Ga0059261_2377	0.53	-0.3
2,476,016	-		Ga0059261_2377	0.53	+0.5
2,476,016	-		Ga0059261_2377	0.53	-0.2
2,476,016	-		Ga0059261_2377	0.53	-0.5
2,476,016	-		Ga0059261_2377	0.53	+1.1
2,476,093	+		Ga0059261_2377	0.62	-0.1
2,476,093	+		Ga0059261_2377	0.62	+0.4
2,476,093	+		Ga0059261_2377	0.62	+1.5
2,476,093	+		Ga0059261_2377	0.62	+0.3
2,476,093	+		Ga0059261_2377	0.62	-0.2
2,476,093	+		Ga0059261_2377	0.62	-0.6
2,476,093	+		Ga0059261_2377	0.62	+0.4
2,476,093	+		Ga0059261_2377	0.62	+1.1
2,476,093	+		Ga0059261_2377	0.62	+0.5
2,476,093	+		Ga0059261_2377	0.62	+0.7
2,476,093	+		Ga0059261_2377	0.62	+0.0
2,476,094	-		Ga0059261_2377	0.62	+0.6
2,476,094	-		Ga0059261_2377	0.62	+0.3
2,476,094	-		Ga0059261_2377	0.62	-0.5
2,476,094	-				-0.1
2,476,109	+		Ga0059261_2377	0.64	+0.6
2,476,110	-		Ga0059261_2377	0.64	+0.3
2,476,110	-		Ga0059261_2377	0.64	+1.7
2,476,110	-		Ga0059261_2377	0.64	+0.2
2,476,110	-		Ga0059261_2377	0.64	-0.2
2,476,192	+		Ga0059261_2377	0.73	+0.5
2,476,192	+		Ga0059261_2377	0.73	+0.9
2,476,192	+		Ga0059261_2377	0.73	+1.5
2,476,252	+		Ga0059261_2377	0.79	+0.5
2,476,252	+		Ga0059261_2377	0.79	+0.3
2,476,252	+		Ga0059261_2377	0.79	+0.1
2,476,252	+		Ga0059261_2377	0.79	-0.9
2,476,348	+		Ga0059261_2377	0.90	-0.1
2,476,348	+		Ga0059261_2377	0.90	+0.5
2,476,348	+		Ga0059261_2377	0.90	-0.3
2,476,348	+		Ga0059261_2377	0.90	+0.9
2,476,348	+		Ga0059261_2377	0.90	-0.5
2,476,348	+		Ga0059261_2377	0.90	-0.2
2,476,348	+		Ga0059261_2377	0.90	-0.3
2,476,348	+		Ga0059261_2377	0.90	-0.7
2,476,348	+		Ga0059261_2377	0.90	+0.3
2,476,349	-				+0.5
2,476,349	-				+0.5
2,476,349	-				+0.4
2,476,349	-				-0.1
2,476,349	-				-0.4
2,476,349	-				+1.0
2,476,349	-				+0.6
2,476,349	-				+0.1
2,476,416	-				-0.3
2,476,416	-				+0.1
2,476,416	-				-0.4
2,476,416	-				+0.0
2,476,469	+				+0.9
2,476,469	+				+0.3
2,476,469	+				+0.2
2,476,470	-				+0.3
2,476,591	+				-0.1
2,476,801	+		Ga0059261_2378	0.62	+0.7
2,476,802	-		Ga0059261_2378	0.62	+0.1
2,476,802	-				-0.7
2,476,802	-		Ga0059261_2378	0.62	-0.4
2,477,019	+				-0.3
2,477,019	+				+0.0
2,477,019	+				+0.7
2,477,019	+				+0.7
2,477,019	+				+0.9
2,477,160	+		Ga0059261_2379	0.39	+0.7
2,477,160	+		Ga0059261_2379	0.39	-0.9
2,477,161	-		Ga0059261_2379	0.39	-0.2
2,477,161	-		Ga0059261_2379	0.39	+1.0
2,477,161	-		Ga0059261_2379	0.39	-0.3
2,477,161	-		Ga0059261_2379	0.39	+0.2
2,477,161	-		Ga0059261_2379	0.39	+1.2
2,477,161	-		Ga0059261_2379	0.39	+0.9
2,477,175	+		Ga0059261_2379	0.42	-1.9
2,477,175	+		Ga0059261_2379	0.42	+0.6
2,477,271	+		Ga0059261_2379	0.62	+0.0
2,477,271	+		Ga0059261_2379	0.62	+0.6
2,477,272	-		Ga0059261_2379	0.62	-0.5
2,477,272	-		Ga0059261_2379	0.62	-1.3
2,477,289	+		Ga0059261_2379	0.66	-1.1
2,477,290	-		Ga0059261_2379	0.66	-0.3
2,477,315	+		Ga0059261_2379	0.71	+0.2
2,477,458	-				-0.1
2,477,458	-				-0.7
2,477,815	-		Ga0059261_2381	0.31	-0.1
2,477,815	-		Ga0059261_2381	0.31	+1.1
2,477,815	-		Ga0059261_2381	0.31	+0.6
2,477,815	-		Ga0059261_2381	0.31	-0.3
2,477,852	+		Ga0059261_2381	0.39	+1.1
2,477,853	-		Ga0059261_2381	0.39	+0.2
2,477,853	-		Ga0059261_2381	0.39	+0.4
2,477,853	-		Ga0059261_2381	0.39	-0.4
2,477,904	+		Ga0059261_2381	0.49	+0.3
2,477,904	+		Ga0059261_2381	0.49	+0.7
2,477,904	+		Ga0059261_2381	0.49	+0.5
2,477,905	-		Ga0059261_2381	0.49	+0.3