Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2341

Experiment: Nalidixic 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.05 mg/ml
2,448,984	+				+0.8
2,449,075	+		Ga0059261_2340	0.17	+0.1
2,449,076	-		Ga0059261_2340	0.18	-0.1
2,449,141	+		Ga0059261_2340	0.23	+0.5
2,449,141	+		Ga0059261_2340	0.23	+0.6
2,449,142	-		Ga0059261_2340	0.24	-0.0
2,449,142	-		Ga0059261_2340	0.24	+0.3
2,449,245	+		Ga0059261_2340	0.33	+0.3
2,449,245	+		Ga0059261_2340	0.33	-0.8
2,449,245	+		Ga0059261_2340	0.33	-1.2
2,449,245	+		Ga0059261_2340	0.33	-1.8
2,449,246	-		Ga0059261_2340	0.33	+0.2
2,449,246	-		Ga0059261_2340	0.33	-2.6
2,449,246	-		Ga0059261_2340	0.33	+0.6
2,449,246	-		Ga0059261_2340	0.33	-0.2
2,449,246	-		Ga0059261_2340	0.33	-0.1
2,449,246	-		Ga0059261_2340	0.33	-0.7
2,449,339	+		Ga0059261_2340	0.42	+0.2
2,449,339	+		Ga0059261_2340	0.42	-0.4
2,449,340	-		Ga0059261_2340	0.42	-1.7
2,449,394	-		Ga0059261_2340	0.47	+1.6
2,449,403	+		Ga0059261_2340	0.47	-0.2
2,449,404	-		Ga0059261_2340	0.47	+0.3
2,449,404	-		Ga0059261_2340	0.47	+0.5
2,449,469	+		Ga0059261_2340	0.53	+0.4
2,449,469	+		Ga0059261_2340	0.53	+0.6
2,449,469	+		Ga0059261_2340	0.53	-0.8
2,449,469	+		Ga0059261_2340	0.53	+0.0
2,449,469	+		Ga0059261_2340	0.53	-0.7
2,449,470	-		Ga0059261_2340	0.54	+0.8
2,449,470	-		Ga0059261_2340	0.54	+0.6
2,449,470	-		Ga0059261_2340	0.54	-0.0
2,449,527	+		Ga0059261_2340	0.59	-0.0
2,449,527	+		Ga0059261_2340	0.59	+0.0
2,449,528	-		Ga0059261_2340	0.59	+0.0
2,449,528	-		Ga0059261_2340	0.59	+0.7
2,449,563	+		Ga0059261_2340	0.62	+0.4
2,449,723	+		Ga0059261_2340	0.77	-0.2
2,449,745	+		Ga0059261_2340	0.79	-0.2
2,449,745	+		Ga0059261_2340	0.79	-0.4
2,449,745	+		Ga0059261_2340	0.79	-0.1
2,449,745	+		Ga0059261_2340	0.79	+0.2
2,449,745	+		Ga0059261_2340	0.79	+0.8
2,449,745	+				+1.6
2,449,746	-				+1.9
2,449,746	-		Ga0059261_2340	0.79	-0.3
2,449,746	-		Ga0059261_2340	0.79	-1.2
2,449,746	-		Ga0059261_2340	0.79	+0.1
2,449,746	-		Ga0059261_2340	0.79	+0.3
2,449,785	+		Ga0059261_2340	0.82	-0.3
2,449,785	+		Ga0059261_2340	0.82	+1.0
2,449,786	-		Ga0059261_2340	0.82	+0.5
2,449,866	+		Ga0059261_2340	0.90	-0.2
2,449,911	+				-2.8
2,449,911	+				-0.2
2,449,911	+				-0.4
2,449,911	+				-0.2
2,449,911	+				+0.2
2,449,938	+				+0.3
2,449,944	+				-0.4
2,449,944	+				-0.1
2,449,944	+				+0.3
2,449,944	+				-0.2
2,449,944	+				-0.3
2,449,944	+				+0.5
2,449,945	-				+1.2
2,449,945	-				+0.4
2,449,945	-				+0.3
2,449,945	-				+0.6
2,449,945	-				+1.5
2,449,945	-				+0.7
2,449,945	-				-0.8
2,449,945	-				-0.4
2,449,945	-				+1.1
2,449,947	+				+0.3
2,449,947	+				-0.3
2,449,947	+				-0.7
2,449,948	-				-0.7
2,449,948	-				-0.1
2,449,948	-				+0.2
2,449,948	-				+0.9
2,449,948	-				-0.2
2,449,961	-				+0.9
2,449,966	+				+0.3
2,449,966	+				+0.5
2,449,966	+				-0.2
2,449,966	+				+0.4
2,449,966	+				-0.3
2,449,967	-				+0.6
2,449,968	+				-1.2
2,449,968	+				+0.0
2,449,968	+				-0.1
2,449,969	-				+0.7
2,449,969	-				+0.3
2,449,969	-				+0.3
2,449,969	-				+0.4
2,449,969	-				+2.1
2,450,058	+		Ga0059261_2341	0.30	-1.5
2,450,058	+		Ga0059261_2341	0.30	+0.9
2,450,059	-		Ga0059261_2341	0.31	-1.7
2,450,059	-		Ga0059261_2341	0.31	+0.5
2,450,120	+		Ga0059261_2341	0.53	-0.3
2,450,120	+		Ga0059261_2341	0.53	-0.1
2,450,145	+		Ga0059261_2341	0.62	-0.6
2,450,145	+		Ga0059261_2341	0.62	+0.1
2,450,145	+		Ga0059261_2341	0.62	-0.6
2,450,145	+		Ga0059261_2341	0.62	+0.1
2,450,145	+		Ga0059261_2341	0.62	+0.4
2,450,145	+		Ga0059261_2341	0.62	+0.7
2,450,145	+		Ga0059261_2341	0.62	-0.9
2,450,145	+		Ga0059261_2341	0.62	+0.1
2,450,145	+		Ga0059261_2341	0.62	+0.1
2,450,145	+		Ga0059261_2341	0.62	+0.2
2,450,145	+		Ga0059261_2341	0.62	+0.0
2,450,146	-		Ga0059261_2341	0.63	-1.1
2,450,146	-		Ga0059261_2341	0.63	+0.5
2,450,146	-		Ga0059261_2341	0.63	-1.3
2,450,146	-		Ga0059261_2341	0.63	-1.7
2,450,146	-		Ga0059261_2341	0.63	+0.2
2,450,146	-		Ga0059261_2341	0.63	-1.7
2,450,146	-		Ga0059261_2341	0.63	-0.1
2,450,147	+		Ga0059261_2341	0.63	-0.6
2,450,147	+		Ga0059261_2341	0.63	+0.7
2,450,147	+		Ga0059261_2341	0.63	-0.3
2,450,147	+		Ga0059261_2341	0.63	-0.7
2,450,147	+		Ga0059261_2341	0.63	-1.0
2,450,148	-		Ga0059261_2341	0.63	-0.5
2,450,148	-		Ga0059261_2341	0.63	-0.4
2,450,148	-		Ga0059261_2341	0.63	+0.8
2,450,260	+				+0.2
2,450,260	+				-0.2
2,450,261	-				+0.9
2,450,281	+		Ga0059261_2342	0.21	-2.3
2,450,281	+		Ga0059261_2342	0.21	+0.1
2,450,281	+		Ga0059261_2342	0.21	+0.6
2,450,281	+		Ga0059261_2342	0.21	-0.1
2,450,282	-		Ga0059261_2342	0.21	-0.4
2,450,282	-		Ga0059261_2342	0.21	-0.2
2,450,282	-		Ga0059261_2342	0.21	+0.7
2,450,282	-		Ga0059261_2342	0.21	-0.2
2,450,386	+		Ga0059261_2342	0.79	+1.7
2,450,387	-		Ga0059261_2342	0.79	+0.2
2,450,402	+		Ga0059261_2342	0.88	+1.5
2,450,402	+		Ga0059261_2342	0.88	+0.5
2,450,402	+		Ga0059261_2342	0.88	+0.4
2,450,402	+		Ga0059261_2342	0.88	-1.2
2,450,402	+		Ga0059261_2342	0.88	-0.1
2,450,402	+		Ga0059261_2342	0.88	+0.2
2,450,403	-		Ga0059261_2342	0.88	-1.4
2,450,403	-		Ga0059261_2342	0.88	-0.7
2,450,403	-		Ga0059261_2342	0.88	-0.0
2,450,458	+				+0.2
2,450,459	-				+1.9
2,450,519	+		Ga0059261_2343	0.17	-0.1
2,450,519	+		Ga0059261_2343	0.17	-1.5
2,450,519	+		Ga0059261_2343	0.17	+0.2
2,450,519	+		Ga0059261_2343	0.17	-0.6
2,450,519	+		Ga0059261_2343	0.17	-0.9
2,450,519	+		Ga0059261_2343	0.17	-0.9
2,450,520	-		Ga0059261_2343	0.17	+0.8
2,450,520	-		Ga0059261_2343	0.17	-0.2
2,450,520	-		Ga0059261_2343	0.17	+0.3
2,450,522	+		Ga0059261_2343	0.18	-0.1
2,450,670	+		Ga0059261_2343	0.88	-0.3
2,450,670	+		Ga0059261_2343	0.88	-0.9
2,450,670	+		Ga0059261_2343	0.88	-0.2
2,450,670	+		Ga0059261_2343	0.88	+0.4
2,450,670	+		Ga0059261_2343	0.88	+0.2
2,450,670	+		Ga0059261_2343	0.88	+0.3
2,450,671	-		Ga0059261_2343	0.88	+1.8
2,450,671	-		Ga0059261_2343	0.88	+0.0
2,450,671	-		Ga0059261_2343	0.88	-0.1
2,450,671	-		Ga0059261_2343	0.88	-0.0
2,450,671	-		Ga0059261_2343	0.88	+0.5
2,450,693	+				+0.7
2,450,693	+				+0.4
2,450,979	+		Ga0059261_2344	0.40	+0.2
2,450,980	-		Ga0059261_2344	0.40	+1.6
2,450,999	+		Ga0059261_2344	0.43	+1.1
2,450,999	+		Ga0059261_2344	0.43	+0.1
2,450,999	+		Ga0059261_2344	0.43	-1.0
2,450,999	+		Ga0059261_2344	0.43	+0.2
2,451,000	-		Ga0059261_2344	0.43	+0.2
2,451,000	-		Ga0059261_2344	0.43	+0.4
2,451,023	+		Ga0059261_2344	0.46	-0.1
2,451,023	+		Ga0059261_2344	0.46	+0.2
2,451,023	+		Ga0059261_2344	0.46	+0.4
2,451,023	+		Ga0059261_2344	0.46	-0.1
2,451,024	-		Ga0059261_2344	0.46	-1.9
2,451,024	-		Ga0059261_2344	0.46	-0.0
2,451,024	-		Ga0059261_2344	0.46	+1.2
2,451,150	+		Ga0059261_2344	0.64	+0.1
2,451,151	-		Ga0059261_2344	0.65	+0.7