Experiment: Nalidixic 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_2161 and Ga0059261_2162 overlap by 4 nucleotides Ga0059261_2162 and Ga0059261_2163 are separated by 24 nucleotides Ga0059261_2163 and Ga0059261_2164 are separated by 22 nucleotides
Ga0059261_2161: Ga0059261_2161 - hydroxymethylbilane synthase (EC 2.5.1.61), at 2,273,306 to 2,274,214
_2161
Ga0059261_2162: Ga0059261_2162 - Uroporphyrinogen-III synthase, at 2,274,211 to 2,274,879
_2162
Ga0059261_2163: Ga0059261_2163 - hypothetical protein, at 2,274,904 to 2,275,797
_2163
Ga0059261_2164: Ga0059261_2164 - Acyl-CoA dehydrogenases, at 2,275,820 to 2,277,004
_2164
Position (kb)
2274
2275 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2273.294 kb on + strand at 2273.294 kb on + strand at 2273.294 kb on + strand at 2273.294 kb on + strand at 2274.894 kb on + strand at 2274.894 kb on + strand at 2274.894 kb on + strand at 2274.894 kb on + strand at 2275.222 kb on + strand at 2275.223 kb on - strand, within Ga0059261_2163 at 2275.358 kb on + strand at 2275.736 kb on + strand at 2275.736 kb on + strand at 2275.736 kb on + strand at 2275.736 kb on + strand at 2275.736 kb on + strand at 2275.736 kb on + strand at 2275.736 kb on + strand at 2275.737 kb on - strand at 2275.737 kb on - strand at 2275.737 kb on - strand at 2275.795 kb on + strand at 2275.795 kb on + strand at 2275.796 kb on - strand at 2275.796 kb on - strand at 2275.796 kb on - strand at 2275.796 kb on - strand at 2275.796 kb on - strand at 2275.796 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Nalidixic 0.05 mg/ml remove 2,273,294 + +0.8 2,273,294 + -0.1 2,273,294 + -0.6 2,273,294 + -0.4 2,274,894 + +1.9 2,274,894 + -0.3 2,274,894 + -1.9 2,274,894 + -1.3 2,275,222 + -0.7 2,275,223 - Ga0059261_2163 0.36 +1.5 2,275,358 + -0.7 2,275,736 + -0.1 2,275,736 + +0.1 2,275,736 + +0.9 2,275,736 + +0.6 2,275,736 + -0.2 2,275,736 + -0.3 2,275,736 + -0.1 2,275,737 - -0.7 2,275,737 - -0.6 2,275,737 - +0.4 2,275,795 + -1.1 2,275,795 + -0.6 2,275,796 - +1.7 2,275,796 - +0.6 2,275,796 - -0.1 2,275,796 - -0.4 2,275,796 - +0.5 2,275,796 - +1.2
Or see this region's nucleotide sequence