Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2056

Experiment: Nalidixic 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.05 mg/ml
2,157,759	+		Ga0059261_2054	0.58	+0.6
2,157,759	+		Ga0059261_2054	0.58	+1.4
2,157,760	-		Ga0059261_2054	0.58	-1.8
2,157,899	+		Ga0059261_2054	0.81	+0.6
2,157,899	+		Ga0059261_2054	0.81	-0.3
2,157,899	+		Ga0059261_2054	0.81	-1.0
2,157,900	-		Ga0059261_2054	0.81	+0.2
2,158,026	+				-1.1
2,158,027	-				-0.3
2,158,027	-				-0.6
2,158,123	+				+0.4
2,158,123	+				+0.3
2,158,124	-				+0.0
2,158,181	-		Ga0059261_2055	0.18	-0.7
2,158,314	+		Ga0059261_2055	0.42	-0.0
2,158,347	+		Ga0059261_2055	0.48	-1.7
2,158,347	+		Ga0059261_2055	0.48	+0.1
2,158,348	-		Ga0059261_2055	0.48	-0.3
2,158,389	+		Ga0059261_2055	0.56	+0.1
2,158,390	-		Ga0059261_2055	0.56	+0.8
2,158,390	-		Ga0059261_2055	0.56	+0.0
2,158,482	+		Ga0059261_2055	0.73	+1.4
2,158,482	+		Ga0059261_2055	0.73	-0.8
2,158,482	+		Ga0059261_2055	0.73	+0.7
2,158,483	-		Ga0059261_2055	0.73	-0.2
2,158,483	-		Ga0059261_2055	0.73	+0.1
2,158,483	-		Ga0059261_2055	0.73	-0.1
2,158,483	-		Ga0059261_2055	0.73	-0.0
2,158,483	-		Ga0059261_2055	0.73	-2.4
2,158,483	-		Ga0059261_2055	0.73	-0.2
2,158,483	-		Ga0059261_2055	0.73	+0.2
2,158,519	+		Ga0059261_2055	0.79	+0.4
2,158,641	+				-0.4
2,158,697	+				+0.7
2,158,697	+				+1.1
2,158,697	+				-1.9
2,158,698	-				-0.9
2,158,698	-				+0.1
2,158,698	-				-0.1
2,158,698	-				-0.5
2,158,698	-				+0.0
2,158,848	+		Ga0059261_2056	0.14	-0.2
2,158,848	+		Ga0059261_2056	0.14	+0.4
2,158,848	+		Ga0059261_2056	0.14	+0.1
2,158,848	+		Ga0059261_2056	0.14	-1.0
2,158,848	+		Ga0059261_2056	0.14	-0.0
2,158,848	+		Ga0059261_2056	0.14	+0.1
2,158,848	+		Ga0059261_2056	0.14	+0.1
2,158,849	-		Ga0059261_2056	0.14	+0.7
2,158,849	-		Ga0059261_2056	0.14	-1.3
2,158,849	-		Ga0059261_2056	0.14	-1.4
2,158,849	-		Ga0059261_2056	0.14	-0.2
2,158,849	-		Ga0059261_2056	0.14	-0.2
2,158,849	-		Ga0059261_2056	0.14	+0.9
2,158,849	-		Ga0059261_2056	0.14	-0.3
2,158,849	-		Ga0059261_2056	0.14	+0.1
2,158,849	-		Ga0059261_2056	0.14	+0.6
2,159,020	-		Ga0059261_2056	0.30	+0.4
2,159,364	+		Ga0059261_2056	0.63	+1.1
2,159,365	-		Ga0059261_2056	0.63	-0.1
2,159,365	-		Ga0059261_2056	0.63	+0.3
2,159,365	-		Ga0059261_2056	0.63	+2.5
2,159,373	+		Ga0059261_2056	0.63	+0.8
2,159,373	+		Ga0059261_2056	0.63	+0.6
2,159,373	+		Ga0059261_2056	0.63	-0.1
2,159,373	+		Ga0059261_2056	0.63	-0.3
2,159,373	+		Ga0059261_2056	0.63	+0.4
2,159,373	+		Ga0059261_2056	0.63	+0.3
2,159,373	+		Ga0059261_2056	0.63	-0.2
2,159,373	+		Ga0059261_2056	0.63	+0.4
2,159,373	+		Ga0059261_2056	0.63	-0.2
2,159,373	+		Ga0059261_2056	0.63	+0.5
2,159,374	-		Ga0059261_2056	0.63	+1.4
2,159,374	-		Ga0059261_2056	0.63	+0.3
2,159,374	-		Ga0059261_2056	0.63	+0.3
2,159,374	-		Ga0059261_2056	0.63	+0.6
2,159,374	-		Ga0059261_2056	0.63	+0.5
2,159,374	-		Ga0059261_2056	0.63	+0.4
2,159,880	+		Ga0059261_2057	0.30	+0.1
2,159,880	+		Ga0059261_2057	0.30	-0.9
2,159,880	+		Ga0059261_2057	0.30	+1.6
2,159,880	+		Ga0059261_2057	0.30	-0.5
2,159,880	+		Ga0059261_2057	0.30	-0.0
2,159,880	+				+1.9
2,159,880	+		Ga0059261_2057	0.30	+3.2
2,159,880	+		Ga0059261_2057	0.30	-0.3
2,159,881	-		Ga0059261_2057	0.31	+0.5
2,159,881	-		Ga0059261_2057	0.31	+0.2
2,159,881	-		Ga0059261_2057	0.31	+0.4
2,159,881	-		Ga0059261_2057	0.31	+0.0
2,159,881	-		Ga0059261_2057	0.31	+0.4
2,160,048	+		Ga0059261_2057	0.72	+0.2
2,160,048	+		Ga0059261_2057	0.72	-1.1
2,160,048	+		Ga0059261_2057	0.72	-0.9
2,160,048	+		Ga0059261_2057	0.72	-0.1
2,160,048	+				-0.1
2,160,048	+		Ga0059261_2057	0.72	+0.5
2,160,048	+		Ga0059261_2057	0.72	+0.0
2,160,048	+		Ga0059261_2057	0.72	+0.3
2,160,048	+		Ga0059261_2057	0.72	-0.1
2,160,048	+		Ga0059261_2057	0.72	+0.2
2,160,049	-		Ga0059261_2057	0.73	+0.5
2,160,049	-		Ga0059261_2057	0.73	+0.6
2,160,049	-		Ga0059261_2057	0.73	-0.6
2,160,114	+		Ga0059261_2057	0.89	+0.2
2,160,114	+		Ga0059261_2057	0.89	+0.1
2,160,114	+		Ga0059261_2057	0.89	+0.5
2,160,114	+		Ga0059261_2057	0.89	-0.4
2,160,115	-		Ga0059261_2057	0.89	-0.7
2,160,115	-		Ga0059261_2057	0.89	+0.9
2,160,115	-		Ga0059261_2057	0.89	+0.3
2,160,115	-		Ga0059261_2057	0.89	-0.6
2,160,115	-		Ga0059261_2057	0.89	+0.7
2,160,115	-		Ga0059261_2057	0.89	-0.4
2,160,115	-		Ga0059261_2057	0.89	-0.4
2,160,221	-				-0.0
2,160,335	+		Ga0059261_2058	0.12	+0.7
2,160,335	+		Ga0059261_2058	0.12	+0.3
2,160,336	-		Ga0059261_2058	0.12	+0.9
2,160,336	-		Ga0059261_2058	0.12	+0.2
2,160,336	-		Ga0059261_2058	0.12	+1.1
2,160,336	-		Ga0059261_2058	0.12	+0.1
2,160,336	-		Ga0059261_2058	0.12	-1.0
2,160,336	-		Ga0059261_2058	0.12	-0.4
2,160,336	-		Ga0059261_2058	0.12	+0.3
2,160,336	-		Ga0059261_2058	0.12	-0.1
2,160,337	+		Ga0059261_2058	0.12	-0.9
2,160,337	+		Ga0059261_2058	0.12	+0.0
2,160,337	+		Ga0059261_2058	0.12	-0.7
2,160,337	+		Ga0059261_2058	0.12	-0.1
2,160,337	+		Ga0059261_2058	0.12	-0.3
2,160,337	+		Ga0059261_2058	0.12	-0.5
2,160,337	+		Ga0059261_2058	0.12	+0.5
2,160,337	+		Ga0059261_2058	0.12	-0.1
2,160,337	+		Ga0059261_2058	0.12	+0.4
2,160,338	-		Ga0059261_2058	0.12	+0.1
2,160,338	-		Ga0059261_2058	0.12	+1.0
2,160,366	+		Ga0059261_2058	0.14	+0.8
2,160,367	-		Ga0059261_2058	0.14	-0.1
2,160,392	+		Ga0059261_2058	0.16	-0.2
2,160,567	+		Ga0059261_2058	0.28	-0.4
2,160,567	+		Ga0059261_2058	0.28	-0.5
2,160,567	+		Ga0059261_2058	0.28	+0.4
2,160,567	+				-0.7
2,160,568	-		Ga0059261_2058	0.28	-1.3
2,160,568	-		Ga0059261_2058	0.28	-0.6
2,160,568	-		Ga0059261_2058	0.28	+0.2
2,160,568	-		Ga0059261_2058	0.28	-0.0
2,160,568	-		Ga0059261_2058	0.28	+1.4
2,160,568	-		Ga0059261_2058	0.28	+1.4
2,160,694	+		Ga0059261_2058	0.37	-1.1
2,160,694	+		Ga0059261_2058	0.37	+0.7
2,160,694	+		Ga0059261_2058	0.37	-0.7
2,160,694	+		Ga0059261_2058	0.37	+0.3
2,160,694	+		Ga0059261_2058	0.37	+3.4
2,160,694	+		Ga0059261_2058	0.37	-0.0
2,160,695	-		Ga0059261_2058	0.37	-0.5
2,160,695	-		Ga0059261_2058	0.37	-0.7
2,160,695	-		Ga0059261_2058	0.37	+0.3
2,160,695	-		Ga0059261_2058	0.37	-0.0
2,160,705	-		Ga0059261_2058	0.37	+0.9
2,160,705	-		Ga0059261_2058	0.37	+0.1
2,160,705	-		Ga0059261_2058	0.37	-0.2
2,160,706	+		Ga0059261_2058	0.37	+0.6
2,160,706	+		Ga0059261_2058	0.37	-0.4
2,160,706	+		Ga0059261_2058	0.37	+0.0
2,160,706	+		Ga0059261_2058	0.37	-0.2
2,160,706	+		Ga0059261_2058	0.37	-1.3
2,160,706	+		Ga0059261_2058	0.37	+0.1
2,160,706	+		Ga0059261_2058	0.37	+0.7
2,160,706	+		Ga0059261_2058	0.37	-1.0
2,160,707	-		Ga0059261_2058	0.37	+0.5
2,160,707	-		Ga0059261_2058	0.37	+0.3
2,160,707	-		Ga0059261_2058	0.37	+0.9
2,160,707	-		Ga0059261_2058	0.37	-0.8
2,160,707	-		Ga0059261_2058	0.37	-0.4