Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1351

Experiment: Nalidixic 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.05 mg/ml
1,418,767	+		Ga0059261_1349	0.57	-1.2
1,418,768	-		Ga0059261_1349	0.57	-0.8
1,418,768	-		Ga0059261_1349	0.57	+0.1
1,418,768	-		Ga0059261_1349	0.57	+0.9
1,418,948	-				-0.1
1,418,948	-				-0.8
1,418,986	+				-0.6
1,418,986	+				-0.4
1,418,987	-				+0.6
1,418,987	-				-1.2
1,418,987	-				+0.3
1,418,989	+				+0.1
1,418,989	+				-0.6
1,418,989	+				-0.8
1,418,990	-				-0.3
1,418,990	-				-0.6
1,418,990	-				+0.1
1,419,006	+				+0.1
1,419,007	-				-0.4
1,419,217	+		Ga0059261_1350	0.38	-0.4
1,419,239	-		Ga0059261_1350	0.42	-0.2
1,419,239	-		Ga0059261_1350	0.42	+0.1
1,419,239	-		Ga0059261_1350	0.42	+0.3
1,419,255	+		Ga0059261_1350	0.45	-0.3
1,419,255	+		Ga0059261_1350	0.45	-0.5
1,419,255	+		Ga0059261_1350	0.45	+0.4
1,419,255	+		Ga0059261_1350	0.45	-0.7
1,419,255	+		Ga0059261_1350	0.45	+0.6
1,419,255	+		Ga0059261_1350	0.45	-2.2
1,419,256	-		Ga0059261_1350	0.45	-0.4
1,419,256	-		Ga0059261_1350	0.45	-1.3
1,419,256	-		Ga0059261_1350	0.45	-1.0
1,419,256	-		Ga0059261_1350	0.45	-0.3
1,419,256	-		Ga0059261_1350	0.45	-0.0
1,419,256	-		Ga0059261_1350	0.45	-0.5
1,419,256	-		Ga0059261_1350	0.45	-1.3
1,419,256	-		Ga0059261_1350	0.45	-0.1
1,419,256	-		Ga0059261_1350	0.45	-0.2
1,419,256	-		Ga0059261_1350	0.45	+0.6
1,419,256	-		Ga0059261_1350	0.45	+2.1
1,419,266	-		Ga0059261_1350	0.47	+0.1
1,419,300	+		Ga0059261_1350	0.53	+0.1
1,419,300	+		Ga0059261_1350	0.53	+1.0
1,419,300	+		Ga0059261_1350	0.53	+0.3
1,419,301	-		Ga0059261_1350	0.53	+0.0
1,419,301	-		Ga0059261_1350	0.53	-1.5
1,419,301	-		Ga0059261_1350	0.53	+0.2
1,419,301	-		Ga0059261_1350	0.53	-0.9
1,419,321	+		Ga0059261_1350	0.57	-0.1
1,419,322	-		Ga0059261_1350	0.57	-1.2
1,419,322	-		Ga0059261_1350	0.57	+0.4
1,419,322	-		Ga0059261_1350	0.57	+1.0
1,419,328	-		Ga0059261_1350	0.58	-0.6
1,419,357	+		Ga0059261_1350	0.63	-0.2
1,419,357	+		Ga0059261_1350	0.63	+0.4
1,419,358	-		Ga0059261_1350	0.63	+0.8
1,419,358	-		Ga0059261_1350	0.63	-0.7
1,419,358	-		Ga0059261_1350	0.63	-0.1
1,419,358	-		Ga0059261_1350	0.63	-0.3
1,419,363	+		Ga0059261_1350	0.64	-0.6
1,419,363	+		Ga0059261_1350	0.64	+0.0
1,419,363	+		Ga0059261_1350	0.64	+0.8
1,419,364	-		Ga0059261_1350	0.64	+0.2
1,419,498	+		Ga0059261_1350	0.88	-1.2
1,419,498	+		Ga0059261_1350	0.88	-2.0
1,419,498	+		Ga0059261_1350	0.88	+0.1
1,419,498	+		Ga0059261_1350	0.88	-0.5
1,419,498	+		Ga0059261_1350	0.88	+0.8
1,419,498	+		Ga0059261_1350	0.88	+0.1
1,419,498	+		Ga0059261_1350	0.88	+0.2
1,419,498	+		Ga0059261_1350	0.88	+0.4
1,419,499	-		Ga0059261_1350	0.89	+0.6
1,419,499	-		Ga0059261_1350	0.89	+0.4
1,419,499	-		Ga0059261_1350	0.89	+1.1
1,419,499	-		Ga0059261_1350	0.89	+0.8
1,419,499	-		Ga0059261_1350	0.89	+0.6
1,419,499	-		Ga0059261_1350	0.89	+0.3
1,419,507	+				-0.2
1,419,507	+				+0.1
1,419,507	+				-0.4
1,419,507	+				-0.5
1,419,507	+				+0.2
1,419,507	+				+0.5
1,419,507	+				-0.5
1,419,508	-				+0.1
1,419,508	-				-0.3
1,419,508	-				-0.1
1,419,508	-				-0.2
1,419,508	-				-0.7
1,419,743	+				+0.1
1,419,743	+				+0.2
1,419,743	+				+0.0
1,419,743	+				-0.6
1,419,743	+				+1.6
1,419,743	+				+0.6
1,419,743	+				-0.2
1,419,743	+				+0.5
1,419,743	+				-0.4
1,419,743	+				+0.1
1,419,743	+				+0.5
1,419,744	-				+0.1
1,419,744	-				-0.6
1,419,744	-				+0.6
1,419,744	-				+0.9
1,419,744	-				+0.6
1,419,744	-				+0.2
1,419,744	-				+0.6
1,419,744	-				+0.9
1,419,744	-				+0.3
1,419,744	-				-0.5
1,419,744	-				-0.0
1,419,744	-				-0.7
1,419,744	-				+0.8
1,419,744	-				+0.1
1,419,744	-				-0.6
1,419,744	-				+1.1
1,419,744	-				+0.5
1,419,744	-				-0.3
1,419,744	-				+0.6
1,419,848	+		Ga0059261_1351	0.15	-0.3
1,419,848	+		Ga0059261_1351	0.15	+0.6
1,419,849	-		Ga0059261_1351	0.15	+0.0
1,420,046	+		Ga0059261_1351	0.26	-0.6
1,420,047	-		Ga0059261_1351	0.26	+0.7
1,420,103	+		Ga0059261_1351	0.29	-0.1
1,420,103	+		Ga0059261_1351	0.29	-0.1
1,420,103	+		Ga0059261_1351	0.29	+0.7
1,420,103	+		Ga0059261_1351	0.29	-0.8
1,420,104	-		Ga0059261_1351	0.29	+1.2
1,420,104	-		Ga0059261_1351	0.29	+0.4
1,420,269	-		Ga0059261_1351	0.37	-1.4
1,420,300	+		Ga0059261_1351	0.39	+0.2
1,420,301	-		Ga0059261_1351	0.39	+0.9
1,420,583	+		Ga0059261_1351	0.54	-1.5
1,420,583	+		Ga0059261_1351	0.54	-0.4
1,420,583	+		Ga0059261_1351	0.54	+0.5
1,420,583	+		Ga0059261_1351	0.54	-0.1
1,420,583	+		Ga0059261_1351	0.54	+1.1
1,420,583	+		Ga0059261_1351	0.54	-0.4
1,420,584	-				+2.4
1,420,584	-		Ga0059261_1351	0.54	+0.5
1,420,584	-		Ga0059261_1351	0.54	-1.2
1,420,584	-		Ga0059261_1351	0.54	+0.1
1,420,584	-		Ga0059261_1351	0.54	+0.0
1,420,584	-		Ga0059261_1351	0.54	+1.0
1,420,811	+		Ga0059261_1351	0.66	+0.4
1,420,811	+		Ga0059261_1351	0.66	+0.2
1,420,811	+		Ga0059261_1351	0.66	-0.3
1,420,811	+		Ga0059261_1351	0.66	+0.1
1,420,811	+		Ga0059261_1351	0.66	-1.5
1,420,811	+				-0.2
1,420,862	+		Ga0059261_1351	0.69	-0.3
1,420,862	+		Ga0059261_1351	0.69	+0.8
1,420,862	+		Ga0059261_1351	0.69	+2.0
1,420,863	-		Ga0059261_1351	0.69	+0.5
1,420,863	-		Ga0059261_1351	0.69	+0.4
1,420,863	-		Ga0059261_1351	0.69	+0.6
1,420,863	-		Ga0059261_1351	0.69	-0.1
1,420,863	-		Ga0059261_1351	0.69	-0.9
1,420,863	-		Ga0059261_1351	0.69	-0.2
1,420,863	-		Ga0059261_1351	0.69	-0.1
1,420,863	-		Ga0059261_1351	0.69	-0.4
1,420,863	-		Ga0059261_1351	0.69	+0.8
1,420,898	+				+3.4
1,420,898	+		Ga0059261_1351	0.71	+1.4
1,420,899	-		Ga0059261_1351	0.71	-1.2
1,420,899	-		Ga0059261_1351	0.71	+0.5
1,420,940	+		Ga0059261_1351	0.73	+0.9
1,420,940	+				-1.5
1,420,940	+		Ga0059261_1351	0.73	+1.6
1,420,940	+		Ga0059261_1351	0.73	+0.5
1,420,940	+		Ga0059261_1351	0.73	+0.8
1,420,940	+		Ga0059261_1351	0.73	+0.5
1,420,941	-		Ga0059261_1351	0.73	+0.8
1,420,941	-		Ga0059261_1351	0.73	-0.1
1,420,941	-		Ga0059261_1351	0.73	+0.1
1,420,941	-		Ga0059261_1351	0.73	+0.4
1,420,941	-		Ga0059261_1351	0.73	+0.5
1,420,941	-		Ga0059261_1351	0.73	+0.7
1,420,941	-		Ga0059261_1351	0.73	+0.6
1,420,941	-		Ga0059261_1351	0.73	+1.0
1,420,943	+		Ga0059261_1351	0.73	-1.2
1,420,944	-		Ga0059261_1351	0.73	+0.6
1,421,027	+		Ga0059261_1351	0.77	+0.6
1,421,027	+		Ga0059261_1351	0.77	+0.5
1,421,027	+		Ga0059261_1351	0.77	+0.2
1,421,028	-		Ga0059261_1351	0.77	-0.1
1,421,028	-		Ga0059261_1351	0.77	-0.4
1,421,028	-		Ga0059261_1351	0.77	+0.2
1,421,028	-		Ga0059261_1351	0.77	-0.1
1,421,028	-		Ga0059261_1351	0.77	+1.1
1,421,043	-		Ga0059261_1351	0.78	+0.8
1,421,063	-		Ga0059261_1351	0.79	+0.8
1,421,357	-				-1.0
1,421,357	-				-0.0
1,421,443	+				+0.2
1,421,443	+				+0.2
1,421,444	-				+1.8
1,421,499	-				+0.1
1,421,499	-				+0.1
1,421,499	-				-0.7
1,421,499	-				-0.4
1,421,533	-				-1.0
1,421,533	-				+0.1
1,421,533	-				-0.8
1,421,543	+				-0.2
1,421,606	+				+0.3
1,421,607	-				-0.4
1,421,607	-				+0.2
1,421,951	-				-0.0