Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1022

Experiment: Nalidixic 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.05 mg/ml
1,058,672	+		Ga0059261_1020	0.71	+0.3
1,058,672	+		Ga0059261_1020	0.71	+0.0
1,058,673	-		Ga0059261_1020	0.71	+0.6
1,058,673	-		Ga0059261_1020	0.71	-0.2
1,058,705	+		Ga0059261_1020	0.74	+0.4
1,058,706	-		Ga0059261_1020	0.74	+0.3
1,058,706	-		Ga0059261_1020	0.74	+0.0
1,058,706	-		Ga0059261_1020	0.74	-0.1
1,058,706	-		Ga0059261_1020	0.74	-0.2
1,058,706	-		Ga0059261_1020	0.74	-0.5
1,058,706	-		Ga0059261_1020	0.74	+0.2
1,058,706	-		Ga0059261_1020	0.74	+0.8
1,058,706	-		Ga0059261_1020	0.74	-0.3
1,058,706	-		Ga0059261_1020	0.74	+0.6
1,058,706	-		Ga0059261_1020	0.74	+0.8
1,058,706	-		Ga0059261_1020	0.74	+0.7
1,058,706	-		Ga0059261_1020	0.74	-0.3
1,058,790	+		Ga0059261_1020	0.83	+0.0
1,058,873	+				-0.2
1,058,873	+				+1.0
1,058,873	+				-1.3
1,058,874	-				+0.7
1,058,874	-				+0.5
1,058,904	-				+0.2
1,058,904	-				+0.3
1,058,904	-				-0.4
1,059,157	-		Ga0059261_1021	0.36	+0.2
1,059,157	-		Ga0059261_1021	0.36	+0.4
1,059,335	-		Ga0059261_1021	0.89	+0.2
1,059,374	-				+0.3
1,059,520	+				+0.4
1,059,520	+				-1.0
1,059,520	+				-1.0
1,059,521	-				+1.1
1,059,521	-				+0.1
1,059,521	-				+0.4
1,059,542	+				-0.1
1,059,611	+				+0.5
1,059,612	-				+0.4
1,059,612	-				+1.8
1,059,612	-				+0.2
1,059,681	+		Ga0059261_1022	0.39	+0.4
1,059,681	+		Ga0059261_1022	0.39	-0.2
1,059,682	-		Ga0059261_1022	0.40	-0.1
1,059,682	-		Ga0059261_1022	0.40	+0.8
1,059,682	-		Ga0059261_1022	0.40	+0.5
1,059,682	-		Ga0059261_1022	0.40	+0.4
1,059,682	-		Ga0059261_1022	0.40	+0.7
1,059,927	+		Ga0059261_1023	0.11	-0.0
1,059,928	-		Ga0059261_1023	0.11	-0.7
1,059,928	-		Ga0059261_1023	0.11	-0.5
1,059,928	-		Ga0059261_1023	0.11	-0.2
1,060,004	+		Ga0059261_1023	0.25	+0.2
1,060,004	+				+2.4
1,060,004	+		Ga0059261_1023	0.25	-0.0
1,060,005	-		Ga0059261_1023	0.25	-0.3
1,060,005	-				-0.2
1,060,005	-		Ga0059261_1023	0.25	+0.7
1,060,005	-		Ga0059261_1023	0.25	-0.8
1,060,036	+		Ga0059261_1023	0.30	-0.2
1,060,036	+		Ga0059261_1023	0.30	+0.3
1,060,036	+		Ga0059261_1023	0.30	+0.8
1,060,037	-		Ga0059261_1023	0.31	-1.0
1,060,037	-		Ga0059261_1023	0.31	-0.4
1,060,037	-		Ga0059261_1023	0.31	-0.2
1,060,037	-		Ga0059261_1023	0.31	-0.9
1,060,037	-		Ga0059261_1023	0.31	-0.2
1,060,037	-		Ga0059261_1023	0.31	+0.3
1,060,037	-		Ga0059261_1023	0.31	-0.1
1,060,039	+		Ga0059261_1023	0.31	-0.3
1,060,039	+		Ga0059261_1023	0.31	-0.2
1,060,039	+		Ga0059261_1023	0.31	+0.3
1,060,039	+		Ga0059261_1023	0.31	+0.4
1,060,039	+		Ga0059261_1023	0.31	-0.3
1,060,040	-		Ga0059261_1023	0.31	-0.6
1,060,040	-		Ga0059261_1023	0.31	-0.5
1,060,060	+		Ga0059261_1023	0.35	+0.2
1,060,060	+		Ga0059261_1023	0.35	-0.3
1,060,061	-		Ga0059261_1023	0.35	-0.3
1,060,061	-		Ga0059261_1023	0.35	+1.8
1,060,061	-				-0.2
1,060,096	+		Ga0059261_1023	0.41	+0.1
1,060,096	+		Ga0059261_1023	0.41	-0.1
1,060,097	-		Ga0059261_1023	0.41	+0.8
1,060,099	+		Ga0059261_1023	0.41	+0.8
1,060,100	-		Ga0059261_1023	0.42	+0.5
1,060,117	+		Ga0059261_1023	0.45	+0.1
1,060,117	+		Ga0059261_1023	0.45	-0.4
1,060,117	+		Ga0059261_1023	0.45	+1.8
1,060,117	+		Ga0059261_1023	0.45	+0.2
1,060,118	-		Ga0059261_1023	0.45	-0.3
1,060,118	-		Ga0059261_1023	0.45	+0.7
1,060,118	-		Ga0059261_1023	0.45	+0.7
1,060,129	+		Ga0059261_1023	0.47	+0.3
1,060,129	+		Ga0059261_1023	0.47	+0.3
1,060,129	+		Ga0059261_1023	0.47	+0.5
1,060,130	-		Ga0059261_1023	0.47	+1.0
1,060,130	-		Ga0059261_1023	0.47	-2.0
1,060,130	-		Ga0059261_1023	0.47	+0.7
1,060,130	-		Ga0059261_1023	0.47	+0.2
1,060,132	+		Ga0059261_1023	0.47	-0.6
1,060,132	+		Ga0059261_1023	0.47	-0.0
1,060,132	+		Ga0059261_1023	0.47	-1.1
1,060,132	+		Ga0059261_1023	0.47	+0.2
1,060,132	+		Ga0059261_1023	0.47	+0.8
1,060,132	+		Ga0059261_1023	0.47	-1.0
1,060,132	+		Ga0059261_1023	0.47	-0.3
1,060,132	+		Ga0059261_1023	0.47	+0.2
1,060,132	+		Ga0059261_1023	0.47	+0.4
1,060,132	+		Ga0059261_1023	0.47	+0.1
1,060,132	+		Ga0059261_1023	0.47	-0.2
1,060,132	+		Ga0059261_1023	0.47	-0.6
1,060,133	-		Ga0059261_1023	0.47	+0.3
1,060,133	-		Ga0059261_1023	0.47	-1.2
1,060,133	-		Ga0059261_1023	0.47	+0.2
1,060,133	-		Ga0059261_1023	0.47	-0.0
1,060,133	-		Ga0059261_1023	0.47	+1.3
1,060,133	-		Ga0059261_1023	0.47	-0.2
1,060,133	-		Ga0059261_1023	0.47	-0.1
1,060,135	+		Ga0059261_1023	0.48	+0.8
1,060,135	+		Ga0059261_1023	0.48	+0.2
1,060,135	+		Ga0059261_1023	0.48	+0.8
1,060,135	+		Ga0059261_1023	0.48	+0.0
1,060,135	+		Ga0059261_1023	0.48	-1.2
1,060,136	-		Ga0059261_1023	0.48	-1.6
1,060,168	+		Ga0059261_1023	0.54	-0.3
1,060,169	-		Ga0059261_1023	0.54	+0.1
1,060,169	-				-1.2
1,060,177	+		Ga0059261_1023	0.55	+0.7
1,060,241	-		Ga0059261_1023	0.66	+0.6
1,060,287	+		Ga0059261_1023	0.75	-1.0
1,060,333	+		Ga0059261_1023	0.83	+0.2
1,060,385	+				+1.3
1,060,424	+				-0.1
1,060,424	+				+0.9
1,060,433	+				-0.1
1,060,433	+				+0.2
1,060,433	+				+0.8
1,060,434	-				-0.4
1,060,434	-				-0.0
1,060,434	-				+0.6
1,060,434	-				+0.0
1,060,515	+				-1.2
1,060,569	+				-0.4
1,060,569	+				+0.8
1,060,569	+				-0.0
1,060,569	+				+0.5
1,060,570	-				+0.5
1,060,570	-				-1.2
1,060,570	-				-0.2
1,060,570	-				-0.8