Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_3191 and DvMF_3192 are separated by 3 nucleotides DvMF_3192 and DvMF_3193 are separated by 16 nucleotides DvMF_3193 and DvMF_3194 are separated by 3 nucleotides
DvMF_3191: DvMF_3191 - 4Fe-4S ferredoxin iron-sulfur binding domain protein (RefSeq), at 4,021,210 to 4,021,899
_3191
DvMF_3192: DvMF_3192 - NADH ubiquinone oxidoreductase 20 kDa subunit (RefSeq), at 4,021,903 to 4,022,343
_3192
DvMF_3193: DvMF_3193 - respiratory-chain NADH dehydrogenase subunit 1 (RefSeq), at 4,022,360 to 4,023,358
_3193
DvMF_3194: DvMF_3194 - NADH dehydrogenase (quinone) (RefSeq), at 4,023,362 to 4,027,156
_3194
Position (kb)
4022
4023
4024 Strain fitness (log2 ratio)
-1
0
1
2 at 4021.568 kb on - strand, within DvMF_3191 at 4022.171 kb on + strand, within DvMF_3192 at 4022.587 kb on - strand, within DvMF_3193 at 4022.624 kb on + strand, within DvMF_3193 at 4023.304 kb on + strand at 4023.421 kb on - strand at 4023.515 kb on - strand at 4023.824 kb on - strand, within DvMF_3194 at 4023.824 kb on - strand, within DvMF_3194 at 4024.133 kb on - strand, within DvMF_3194 at 4024.203 kb on - strand, within DvMF_3194 at 4024.300 kb on - strand, within DvMF_3194
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 4,021,568 - DvMF_3191 0.52 +1.7 4,022,171 + DvMF_3192 0.61 +0.3 4,022,587 - DvMF_3193 0.23 -0.3 4,022,624 + DvMF_3193 0.26 +1.3 4,023,304 + +2.3 4,023,421 - -0.3 4,023,515 - -1.0 4,023,824 - DvMF_3194 0.12 +0.3 4,023,824 - DvMF_3194 0.12 +0.9 4,024,133 - DvMF_3194 0.20 +1.3 4,024,203 - DvMF_3194 0.22 +0.8 4,024,300 - DvMF_3194 0.25 -0.4
Or see this region's nucleotide sequence