Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1144 and DvMF_1145 overlap by 4 nucleotides DvMF_1145 and DvMF_1146 are separated by 532 nucleotides DvMF_1146 and DvMF_1147 are separated by 966 nucleotides
DvMF_1144: DvMF_1144 - hypothetical protein (RefSeq), at 1,403,824 to 1,404,039
_1144
DvMF_1145: DvMF_1145 - hypothetical protein (RefSeq), at 1,404,036 to 1,404,221
_1145
DvMF_1146: DvMF_1146 - hypothetical protein (RefSeq), at 1,404,754 to 1,405,446
_1146
DvMF_1147: DvMF_1147 - L-lactate permease family protein, putative (RefSeq), at 1,406,413 to 1,407,966
_1147
Position (kb)
1404
1405
1406 Strain fitness (log2 ratio)
-2
-1
0
1 at 1403.783 kb on + strand at 1403.815 kb on - strand at 1403.829 kb on - strand at 1403.835 kb on - strand at 1403.948 kb on + strand, within DvMF_1144 at 1403.948 kb on + strand, within DvMF_1144 at 1403.976 kb on + strand, within DvMF_1144 at 1404.095 kb on + strand, within DvMF_1145 at 1404.555 kb on + strand at 1404.563 kb on - strand at 1404.676 kb on + strand at 1404.803 kb on - strand at 1404.854 kb on + strand, within DvMF_1146 at 1405.166 kb on + strand, within DvMF_1146 at 1405.263 kb on - strand, within DvMF_1146 at 1405.374 kb on - strand, within DvMF_1146 at 1405.407 kb on + strand at 1405.414 kb on + strand at 1405.414 kb on + strand at 1405.414 kb on + strand at 1405.422 kb on - strand at 1405.422 kb on - strand at 1405.748 kb on + strand at 1405.820 kb on + strand at 1405.875 kb on + strand at 1405.933 kb on + strand at 1405.941 kb on - strand at 1406.094 kb on - strand at 1406.414 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 1,403,783 + -0.5 1,403,815 - -0.3 1,403,829 - -0.6 1,403,835 - -0.6 1,403,948 + DvMF_1144 0.57 -0.6 1,403,948 + DvMF_1144 0.57 -0.1 1,403,976 + DvMF_1144 0.70 -0.5 1,404,095 + DvMF_1145 0.32 -0.7 1,404,555 + -0.1 1,404,563 - -0.7 1,404,676 + +0.1 1,404,803 - -0.5 1,404,854 + DvMF_1146 0.14 -1.9 1,405,166 + DvMF_1146 0.59 -0.5 1,405,263 - DvMF_1146 0.73 -0.7 1,405,374 - DvMF_1146 0.89 -1.5 1,405,407 + -0.9 1,405,414 + -0.4 1,405,414 + -0.9 1,405,414 + -0.4 1,405,422 - -0.1 1,405,422 - -0.2 1,405,748 + -0.5 1,405,820 + -0.8 1,405,875 + -0.4 1,405,933 + -0.7 1,405,941 - -0.7 1,406,094 - -0.3 1,406,414 + -0.2
Or see this region's nucleotide sequence