Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0937 and DvMF_0938 are separated by 4 nucleotides DvMF_0938 and DvMF_0939 are separated by 306 nucleotides DvMF_0939 and DvMF_0940 are separated by 167 nucleotides
DvMF_0937: DvMF_0937 - ferredoxin-NADP(+) reductase subunit alpha (RefSeq), at 1,137,169 to 1,138,017
_0937
DvMF_0938: DvMF_0938 - putative oxidoreductase (RefSeq), at 1,138,022 to 1,139,467
_0938
DvMF_0939: DvMF_0939 - hypothetical protein (RefSeq), at 1,139,774 to 1,140,064
_0939
DvMF_0940: DvMF_0940 - histidinol phosphate phosphatase HisJ family (RefSeq), at 1,140,232 to 1,141,056
_0940
Position (kb)
1138
1139
1140 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1137.099 kb on + strand at 1137.406 kb on - strand, within DvMF_0937 at 1137.537 kb on - strand, within DvMF_0937 at 1137.667 kb on + strand, within DvMF_0937 at 1137.667 kb on + strand, within DvMF_0937 at 1137.713 kb on - strand, within DvMF_0937 at 1137.713 kb on - strand, within DvMF_0937 at 1137.792 kb on + strand, within DvMF_0937 at 1137.971 kb on - strand at 1138.014 kb on - strand at 1138.032 kb on + strand at 1138.143 kb on - strand at 1138.190 kb on + strand, within DvMF_0938 at 1138.383 kb on - strand, within DvMF_0938 at 1138.383 kb on - strand, within DvMF_0938 at 1138.473 kb on - strand, within DvMF_0938 at 1138.482 kb on + strand, within DvMF_0938 at 1138.537 kb on - strand, within DvMF_0938 at 1138.557 kb on + strand, within DvMF_0938 at 1138.661 kb on + strand, within DvMF_0938 at 1138.933 kb on - strand, within DvMF_0938 at 1138.967 kb on + strand, within DvMF_0938 at 1139.231 kb on - strand, within DvMF_0938 at 1139.265 kb on - strand, within DvMF_0938 at 1139.883 kb on + strand, within DvMF_0939 at 1139.895 kb on + strand, within DvMF_0939 at 1139.973 kb on + strand, within DvMF_0939 at 1140.150 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 1,137,099 + -0.8 1,137,406 - DvMF_0937 0.28 -0.6 1,137,537 - DvMF_0937 0.43 -2.3 1,137,667 + DvMF_0937 0.59 -0.6 1,137,667 + DvMF_0937 0.59 -0.8 1,137,713 - DvMF_0937 0.64 -0.5 1,137,713 - DvMF_0937 0.64 -0.2 1,137,792 + DvMF_0937 0.73 -1.2 1,137,971 - -0.8 1,138,014 - -0.3 1,138,032 + -0.1 1,138,143 - -1.0 1,138,190 + DvMF_0938 0.12 -0.9 1,138,383 - DvMF_0938 0.25 -0.5 1,138,383 - DvMF_0938 0.25 -0.2 1,138,473 - DvMF_0938 0.31 -0.5 1,138,482 + DvMF_0938 0.32 -1.7 1,138,537 - DvMF_0938 0.36 -0.5 1,138,557 + DvMF_0938 0.37 -1.1 1,138,661 + DvMF_0938 0.44 -1.5 1,138,933 - DvMF_0938 0.63 -3.0 1,138,967 + DvMF_0938 0.65 -0.4 1,139,231 - DvMF_0938 0.84 -1.3 1,139,265 - DvMF_0938 0.86 -0.6 1,139,883 + DvMF_0939 0.37 -0.4 1,139,895 + DvMF_0939 0.42 +0.3 1,139,973 + DvMF_0939 0.68 +0.2 1,140,150 - -0.6
Or see this region's nucleotide sequence