Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0471 and DvMF_0472 are separated by 9 nucleotides DvMF_0472 and DvMF_0473 are separated by 69 nucleotides DvMF_0473 and DvMF_0474 are separated by 168 nucleotides
DvMF_0471: DvMF_0471 - DNA repair protein RadA (RefSeq), at 553,249 to 554,727
_0471
DvMF_0472: DvMF_0472 - hypothetical protein (RefSeq), at 554,737 to 555,705
_0472
DvMF_0473: DvMF_0473 - hypoxanthine phosphoribosyltransferase (RefSeq), at 555,775 to 556,314
_0473
DvMF_0474: DvMF_0474 - acetyltransferase (RefSeq), at 556,483 to 556,950
_0474
Position (kb) 554
555
556 Strain fitness (log2 ratio) -2
-1
0
1
2 at 553.852 kb on - strand, within DvMF_0471 at 553.862 kb on - strand, within DvMF_0471 at 553.883 kb on + strand, within DvMF_0471 at 553.987 kb on - strand, within DvMF_0471 at 554.171 kb on + strand, within DvMF_0471 at 554.525 kb on - strand, within DvMF_0471 at 554.613 kb on - strand at 554.628 kb on + strand at 554.628 kb on + strand at 554.628 kb on + strand at 554.636 kb on - strand at 554.827 kb on - strand at 554.847 kb on - strand, within DvMF_0472 at 555.112 kb on + strand, within DvMF_0472 at 555.227 kb on - strand, within DvMF_0472 at 555.255 kb on + strand, within DvMF_0472 at 555.315 kb on - strand, within DvMF_0472 at 555.464 kb on + strand, within DvMF_0472 at 555.619 kb on - strand at 555.619 kb on - strand at 555.631 kb on - strand at 555.666 kb on + strand at 555.847 kb on + strand, within DvMF_0473 at 556.066 kb on - strand, within DvMF_0473 at 556.141 kb on + strand, within DvMF_0473 at 556.201 kb on + strand, within DvMF_0473 at 556.276 kb on - strand at 556.524 kb on + strand at 556.659 kb on - strand, within DvMF_0474
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 553,852 - DvMF_0471 0.41 -0.2 553,862 - DvMF_0471 0.41 -0.3 553,883 + DvMF_0471 0.43 -0.5 553,987 - DvMF_0471 0.50 -1.6 554,171 + DvMF_0471 0.62 -2.4 554,525 - DvMF_0471 0.86 -0.5 554,613 - -0.4 554,628 + -0.0 554,628 + +0.9 554,628 + -0.6 554,636 - -0.2 554,827 - +1.4 554,847 - DvMF_0472 0.11 +0.9 555,112 + DvMF_0472 0.39 +0.9 555,227 - DvMF_0472 0.51 +0.7 555,255 + DvMF_0472 0.53 +0.6 555,315 - DvMF_0472 0.60 +0.5 555,464 + DvMF_0472 0.75 +1.5 555,619 - +0.6 555,619 - +1.2 555,631 - +1.2 555,666 + +0.9 555,847 + DvMF_0473 0.13 +2.0 556,066 - DvMF_0473 0.54 -0.3 556,141 + DvMF_0473 0.68 -0.1 556,201 + DvMF_0473 0.79 +0.4 556,276 - -0.5 556,524 + -0.5 556,659 - DvMF_0474 0.38 -0.4
Or see this region's nucleotide sequence