Experiment: m.b. Benzethonium chloride 0.008 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_4200 and Dshi_4201 overlap by 4 nucleotides Dshi_4201 and Dshi_4202 overlap by 4 nucleotides Dshi_4202 and Dshi_4203 are separated by 47 nucleotides
Dshi_4200: Dshi_4200 - Carbon-monoxide dehydrogenase (acceptor) (RefSeq), at 46,743 to 47,576
_4200
Dshi_4201: Dshi_4201 - (2Fe-2S)-binding domain protein (RefSeq), at 47,573 to 48,073
_4201
Dshi_4202: Dshi_4202 - Carbon-monoxide dehydrogenase (acceptor) (RefSeq), at 48,070 to 50,451
_4202
Dshi_4203: Dshi_4203 - TRAP dicarboxylate transporter- DctP subunit (RefSeq), at 50,499 to 51,551
_4203
Position (kb)
48
49
50
51 Strain fitness (log2 ratio)
-1
0
1
2 at 47.297 kb on + strand, within Dshi_4200 at 47.316 kb on - strand, within Dshi_4200 at 47.331 kb on + strand, within Dshi_4200 at 47.589 kb on - strand at 47.630 kb on + strand, within Dshi_4201 at 47.638 kb on + strand, within Dshi_4201 at 47.638 kb on - strand, within Dshi_4201 at 47.651 kb on + strand at 47.690 kb on - strand, within Dshi_4201 at 47.816 kb on + strand, within Dshi_4201 at 48.159 kb on - strand at 48.231 kb on - strand at 48.328 kb on + strand, within Dshi_4202 at 48.348 kb on - strand, within Dshi_4202 at 49.104 kb on - strand, within Dshi_4202 at 49.322 kb on + strand, within Dshi_4202 at 49.332 kb on + strand at 49.399 kb on + strand, within Dshi_4202 at 49.400 kb on - strand, within Dshi_4202 at 49.484 kb on - strand, within Dshi_4202 at 49.620 kb on + strand, within Dshi_4202 at 49.620 kb on + strand, within Dshi_4202 at 49.962 kb on - strand, within Dshi_4202 at 49.998 kb on + strand, within Dshi_4202 at 50.107 kb on - strand, within Dshi_4202 at 50.324 kb on - strand at 50.366 kb on + strand at 50.516 kb on + strand at 50.632 kb on - strand, within Dshi_4203 at 50.639 kb on + strand, within Dshi_4203 at 50.660 kb on + strand, within Dshi_4203 at 50.678 kb on - strand, within Dshi_4203 at 50.784 kb on + strand, within Dshi_4203 at 50.846 kb on + strand, within Dshi_4203 at 50.890 kb on - strand, within Dshi_4203 at 50.896 kb on - strand, within Dshi_4203 at 50.922 kb on - strand, within Dshi_4203 at 51.164 kb on + strand, within Dshi_4203 at 51.194 kb on + strand, within Dshi_4203 at 51.196 kb on - strand, within Dshi_4203 at 51.372 kb on - strand, within Dshi_4203 at 51.374 kb on + strand, within Dshi_4203 at 51.414 kb on + strand, within Dshi_4203
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.008 mM remove 47,297 + Dshi_4200 0.66 -1.2 47,316 - Dshi_4200 0.69 +0.6 47,331 + Dshi_4200 0.71 -0.1 47,589 - +0.6 47,630 + Dshi_4201 0.11 -0.4 47,638 + Dshi_4201 0.13 -0.4 47,638 - Dshi_4201 0.13 -1.0 47,651 + -0.4 47,690 - Dshi_4201 0.23 -0.9 47,816 + Dshi_4201 0.49 -0.8 48,159 - -1.7 48,231 - -1.7 48,328 + Dshi_4202 0.11 -1.6 48,348 - Dshi_4202 0.12 +2.3 49,104 - Dshi_4202 0.43 +0.1 49,322 + Dshi_4202 0.53 -1.4 49,332 + +1.6 49,399 + Dshi_4202 0.56 +1.7 49,400 - Dshi_4202 0.56 +0.8 49,484 - Dshi_4202 0.59 +0.7 49,620 + Dshi_4202 0.65 +0.3 49,620 + Dshi_4202 0.65 +0.1 49,962 - Dshi_4202 0.79 +1.1 49,998 + Dshi_4202 0.81 -0.5 50,107 - Dshi_4202 0.86 -0.3 50,324 - -1.4 50,366 + -1.0 50,516 + -1.4 50,632 - Dshi_4203 0.13 +0.8 50,639 + Dshi_4203 0.13 -1.0 50,660 + Dshi_4203 0.15 -1.4 50,678 - Dshi_4203 0.17 +0.6 50,784 + Dshi_4203 0.27 -0.1 50,846 + Dshi_4203 0.33 +1.0 50,890 - Dshi_4203 0.37 -1.1 50,896 - Dshi_4203 0.38 -1.6 50,922 - Dshi_4203 0.40 -1.4 51,164 + Dshi_4203 0.63 -1.1 51,194 + Dshi_4203 0.66 +0.4 51,196 - Dshi_4203 0.66 +1.9 51,372 - Dshi_4203 0.83 +0.2 51,374 + Dshi_4203 0.83 +0.4 51,414 + Dshi_4203 0.87 +0.6
Or see this region's nucleotide sequence