Experiment: m.b. Benzethonium chloride 0.008 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_4186 and Dshi_4187 overlap by 4 nucleotides Dshi_4187 and Dshi_4188 are separated by 13 nucleotides Dshi_4188 and Dshi_4189 are separated by 95 nucleotides
Dshi_4186: Dshi_4186 - ABC transporter related (RefSeq), at 32,317 to 33,138
_4186
Dshi_4187: Dshi_4187 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 33,135 to 33,890
_4187
Dshi_4188: Dshi_4188 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 33,904 to 34,665
_4188
Dshi_4189: Dshi_4189 - ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein (RefSeq), at 34,761 to 35,777
_4189
Position (kb) 33
34
35 Strain fitness (log2 ratio) -2
-1
0
1 at 32.954 kb on - strand, within Dshi_4186 at 33.036 kb on - strand, within Dshi_4186 at 33.081 kb on + strand at 33.148 kb on + strand at 33.372 kb on + strand, within Dshi_4187 at 33.401 kb on - strand, within Dshi_4187 at 33.403 kb on - strand, within Dshi_4187 at 33.474 kb on + strand, within Dshi_4187 at 33.482 kb on - strand, within Dshi_4187 at 33.482 kb on - strand, within Dshi_4187 at 33.852 kb on + strand at 34.437 kb on + strand, within Dshi_4188 at 34.607 kb on + strand at 34.752 kb on - strand at 34.836 kb on + strand at 34.894 kb on + strand, within Dshi_4189 at 34.975 kb on - strand, within Dshi_4189 at 35.378 kb on - strand, within Dshi_4189 at 35.397 kb on - strand, within Dshi_4189 at 35.631 kb on + strand, within Dshi_4189
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.008 mM remove 32,954 - Dshi_4186 0.77 +0.6 33,036 - Dshi_4186 0.87 +0.0 33,081 + -1.0 33,148 + +1.2 33,372 + Dshi_4187 0.31 +0.1 33,401 - Dshi_4187 0.35 -1.4 33,403 - Dshi_4187 0.35 -1.7 33,474 + Dshi_4187 0.45 +1.6 33,482 - Dshi_4187 0.46 +1.2 33,482 - Dshi_4187 0.46 -2.0 33,852 + -0.4 34,437 + Dshi_4188 0.70 +1.2 34,607 + -0.9 34,752 - -2.3 34,836 + -0.1 34,894 + Dshi_4189 0.13 -0.4 34,975 - Dshi_4189 0.21 -0.1 35,378 - Dshi_4189 0.61 -0.7 35,397 - Dshi_4189 0.63 +0.0 35,631 + Dshi_4189 0.86 -1.4
Or see this region's nucleotide sequence