Experiment: m.b. Benzethonium chloride 0.008 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3858 and Dshi_3859 overlap by 4 nucleotides Dshi_3859 and Dshi_3860 are separated by 133 nucleotides Dshi_3860 and Dshi_3861 are separated by 180 nucleotides
Dshi_3858: Dshi_3858 - protein of unknown function DUF940 membrane lipoprotein putative (RefSeq), at 66,007 to 68,247
_3858
Dshi_3859: Dshi_3859 - hypothetical protein (RefSeq), at 68,244 to 69,005
_3859
Dshi_3860: Dshi_3860 - hypothetical protein (RefSeq), at 69,139 to 69,381
_3860
Dshi_3861: Dshi_3861 - UDP-glucose 6-dehydrogenase (RefSeq), at 69,562 to 70,758
_3861
Position (kb) 68
69
70 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 67.323 kb on - strand, within Dshi_3858 at 67.429 kb on - strand, within Dshi_3858 at 67.433 kb on + strand, within Dshi_3858 at 67.433 kb on + strand, within Dshi_3858 at 67.512 kb on - strand, within Dshi_3858 at 67.520 kb on + strand, within Dshi_3858 at 67.520 kb on + strand, within Dshi_3858 at 67.579 kb on + strand, within Dshi_3858 at 67.643 kb on + strand, within Dshi_3858 at 67.668 kb on + strand, within Dshi_3858 at 67.676 kb on - strand, within Dshi_3858 at 67.743 kb on + strand, within Dshi_3858 at 67.798 kb on + strand, within Dshi_3858 at 67.865 kb on - strand, within Dshi_3858 at 67.904 kb on + strand, within Dshi_3858 at 67.904 kb on + strand, within Dshi_3858 at 67.912 kb on - strand, within Dshi_3858 at 67.947 kb on - strand, within Dshi_3858 at 67.955 kb on + strand, within Dshi_3858 at 68.028 kb on - strand at 68.229 kb on + strand at 68.340 kb on + strand, within Dshi_3859 at 68.377 kb on - strand, within Dshi_3859 at 68.501 kb on - strand, within Dshi_3859 at 68.553 kb on - strand, within Dshi_3859 at 68.557 kb on + strand, within Dshi_3859 at 68.633 kb on + strand, within Dshi_3859 at 68.712 kb on - strand, within Dshi_3859 at 68.716 kb on - strand, within Dshi_3859 at 68.727 kb on + strand, within Dshi_3859 at 68.731 kb on - strand, within Dshi_3859 at 68.747 kb on + strand, within Dshi_3859 at 68.778 kb on + strand, within Dshi_3859 at 68.791 kb on - strand, within Dshi_3859 at 68.803 kb on - strand, within Dshi_3859 at 68.838 kb on - strand, within Dshi_3859 at 68.868 kb on + strand, within Dshi_3859 at 68.868 kb on + strand, within Dshi_3859 at 68.876 kb on - strand, within Dshi_3859 at 68.918 kb on + strand, within Dshi_3859 at 68.920 kb on + strand, within Dshi_3859 at 68.920 kb on + strand, within Dshi_3859 at 68.928 kb on - strand, within Dshi_3859 at 68.928 kb on - strand, within Dshi_3859 at 68.959 kb on - strand at 69.078 kb on - strand at 69.080 kb on + strand at 69.080 kb on + strand at 69.098 kb on - strand at 69.103 kb on - strand at 69.213 kb on + strand, within Dshi_3860 at 69.221 kb on - strand, within Dshi_3860 at 69.376 kb on + strand at 69.565 kb on + strand at 69.573 kb on - strand at 69.573 kb on - strand at 69.646 kb on - strand at 69.776 kb on - strand, within Dshi_3861 at 69.857 kb on - strand, within Dshi_3861 at 69.963 kb on - strand, within Dshi_3861
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.008 mM remove 67,323 - Dshi_3858 0.59 -0.8 67,429 - Dshi_3858 0.63 -3.9 67,433 + Dshi_3858 0.64 -1.5 67,433 + Dshi_3858 0.64 -0.1 67,512 - Dshi_3858 0.67 +1.1 67,520 + Dshi_3858 0.68 +0.4 67,520 + Dshi_3858 0.68 -2.1 67,579 + Dshi_3858 0.70 -2.7 67,643 + Dshi_3858 0.73 -3.1 67,668 + Dshi_3858 0.74 -0.6 67,676 - Dshi_3858 0.74 -0.3 67,743 + Dshi_3858 0.77 -0.6 67,798 + Dshi_3858 0.80 +0.4 67,865 - Dshi_3858 0.83 -1.1 67,904 + Dshi_3858 0.85 -3.7 67,904 + Dshi_3858 0.85 -2.1 67,912 - Dshi_3858 0.85 -1.7 67,947 - Dshi_3858 0.87 +0.6 67,955 + Dshi_3858 0.87 +2.4 68,028 - -1.2 68,229 + -1.7 68,340 + Dshi_3859 0.13 +0.6 68,377 - Dshi_3859 0.17 -0.1 68,501 - Dshi_3859 0.34 -0.5 68,553 - Dshi_3859 0.41 -0.1 68,557 + Dshi_3859 0.41 -3.6 68,633 + Dshi_3859 0.51 -0.9 68,712 - Dshi_3859 0.61 -0.7 68,716 - Dshi_3859 0.62 -2.7 68,727 + Dshi_3859 0.63 -2.9 68,731 - Dshi_3859 0.64 -2.2 68,747 + Dshi_3859 0.66 -2.0 68,778 + Dshi_3859 0.70 -3.7 68,791 - Dshi_3859 0.72 -0.6 68,803 - Dshi_3859 0.73 -2.7 68,838 - Dshi_3859 0.78 -0.6 68,868 + Dshi_3859 0.82 -3.1 68,868 + Dshi_3859 0.82 -0.3 68,876 - Dshi_3859 0.83 -2.4 68,918 + Dshi_3859 0.88 -2.6 68,920 + Dshi_3859 0.89 +0.7 68,920 + Dshi_3859 0.89 -1.1 68,928 - Dshi_3859 0.90 -1.5 68,928 - Dshi_3859 0.90 +0.7 68,959 - -0.8 69,078 - -0.5 69,080 + -0.7 69,080 + -1.5 69,098 - -1.9 69,103 - -1.4 69,213 + Dshi_3860 0.30 -4.0 69,221 - Dshi_3860 0.34 -1.9 69,376 + -0.2 69,565 + -2.4 69,573 - +0.5 69,573 - -1.1 69,646 - -3.3 69,776 - Dshi_3861 0.18 -2.7 69,857 - Dshi_3861 0.25 -3.3 69,963 - Dshi_3861 0.34 -2.1
Or see this region's nucleotide sequence