Experiment: m.b. Benzethonium chloride 0.008 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3536 and Dshi_3537 are separated by 31 nucleotides Dshi_3537 and Dshi_3538 are separated by 46 nucleotides Dshi_3538 and Dshi_3539 overlap by 4 nucleotides
Dshi_3536: Dshi_3536 - magnesium chelatase, H subunit (RefSeq), at 3,716,986 to 3,720,570
_3536
Dshi_3537: Dshi_3537 - light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein (RefSeq), at 3,720,602 to 3,721,501
_3537
Dshi_3538: Dshi_3538 - magnesium protoporphyrin O-methyltransferase (RefSeq), at 3,721,548 to 3,722,231
_3538
Dshi_3539: Dshi_3539 - PUCC protein (RefSeq), at 3,722,228 to 3,723,673
_3539
Position (kb)
3721
3722
3723 Strain fitness (log2 ratio)
-1
0
1
2 at 3720.613 kb on + strand at 3720.621 kb on - strand at 3720.630 kb on - strand at 3720.713 kb on + strand, within Dshi_3537 at 3720.732 kb on - strand, within Dshi_3537 at 3720.732 kb on - strand, within Dshi_3537 at 3720.836 kb on - strand, within Dshi_3537 at 3720.846 kb on + strand, within Dshi_3537 at 3720.904 kb on - strand, within Dshi_3537 at 3720.939 kb on - strand, within Dshi_3537 at 3721.016 kb on - strand, within Dshi_3537 at 3721.055 kb on - strand, within Dshi_3537 at 3721.137 kb on - strand, within Dshi_3537 at 3721.187 kb on + strand, within Dshi_3537 at 3721.202 kb on + strand, within Dshi_3537 at 3721.210 kb on + strand, within Dshi_3537 at 3721.212 kb on - strand, within Dshi_3537 at 3721.385 kb on + strand, within Dshi_3537 at 3721.400 kb on + strand, within Dshi_3537 at 3721.408 kb on - strand, within Dshi_3537 at 3721.423 kb on - strand at 3721.434 kb on + strand at 3721.566 kb on + strand at 3721.566 kb on + strand at 3721.603 kb on + strand at 3721.650 kb on - strand, within Dshi_3538 at 3721.830 kb on - strand, within Dshi_3538 at 3721.834 kb on - strand, within Dshi_3538 at 3721.898 kb on - strand, within Dshi_3538 at 3721.967 kb on - strand, within Dshi_3538 at 3722.053 kb on - strand, within Dshi_3538 at 3722.056 kb on + strand, within Dshi_3538 at 3722.115 kb on - strand, within Dshi_3538 at 3722.126 kb on - strand, within Dshi_3538 at 3722.312 kb on + strand at 3722.555 kb on - strand, within Dshi_3539 at 3722.683 kb on - strand, within Dshi_3539 at 3722.745 kb on + strand, within Dshi_3539 at 3722.958 kb on + strand, within Dshi_3539 at 3723.084 kb on + strand, within Dshi_3539 at 3723.223 kb on - strand, within Dshi_3539
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.008 mM remove 3,720,613 + +0.5 3,720,621 - +1.4 3,720,630 - +2.5 3,720,713 + Dshi_3537 0.12 +1.7 3,720,732 - Dshi_3537 0.14 +1.1 3,720,732 - Dshi_3537 0.14 +1.6 3,720,836 - Dshi_3537 0.26 -0.7 3,720,846 + Dshi_3537 0.27 +2.4 3,720,904 - Dshi_3537 0.34 +1.7 3,720,939 - Dshi_3537 0.37 +1.1 3,721,016 - Dshi_3537 0.46 +2.1 3,721,055 - Dshi_3537 0.50 -0.3 3,721,137 - Dshi_3537 0.59 -1.7 3,721,187 + Dshi_3537 0.65 +1.1 3,721,202 + Dshi_3537 0.67 +1.3 3,721,210 + Dshi_3537 0.68 +1.1 3,721,212 - Dshi_3537 0.68 +0.0 3,721,385 + Dshi_3537 0.87 +1.2 3,721,400 + Dshi_3537 0.89 +2.2 3,721,408 - Dshi_3537 0.90 +0.8 3,721,423 - +1.1 3,721,434 + +0.7 3,721,566 + +1.7 3,721,566 + +2.6 3,721,603 + +2.1 3,721,650 - Dshi_3538 0.15 -0.1 3,721,830 - Dshi_3538 0.41 +0.5 3,721,834 - Dshi_3538 0.42 +1.3 3,721,898 - Dshi_3538 0.51 +1.7 3,721,967 - Dshi_3538 0.61 +0.3 3,722,053 - Dshi_3538 0.74 +1.1 3,722,056 + Dshi_3538 0.74 +0.1 3,722,115 - Dshi_3538 0.83 +1.0 3,722,126 - Dshi_3538 0.85 -0.9 3,722,312 + +0.8 3,722,555 - Dshi_3539 0.23 +1.6 3,722,683 - Dshi_3539 0.31 +2.1 3,722,745 + Dshi_3539 0.36 +2.1 3,722,958 + Dshi_3539 0.50 +1.5 3,723,084 + Dshi_3539 0.59 +0.2 3,723,223 - Dshi_3539 0.69 +0.2
Or see this region's nucleotide sequence