Experiment: m.b. Benzethonium chloride 0.008 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3503 and Dshi_3504 overlap by 4 nucleotides Dshi_3504 and Dshi_3505 overlap by 4 nucleotides Dshi_3505 and Dshi_3506 overlap by 4 nucleotides
Dshi_3503: Dshi_3503 - magnesium chelatase ATPase subunit D (RefSeq), at 3,683,499 to 3,685,220
_3503
Dshi_3504: Dshi_3504 - alpha/beta hydrolase fold (RefSeq), at 3,685,217 to 3,686,125
_3504
Dshi_3505: Dshi_3505 - transcriptional regulator, MarR family (RefSeq), at 3,686,122 to 3,686,574
_3505
Dshi_3506: Dshi_3506 - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (RefSeq), at 3,686,571 to 3,687,404
_3506
Position (kb)
3685
3686
3687 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3684.459 kb on - strand, within Dshi_3503 at 3684.496 kb on + strand, within Dshi_3503 at 3684.507 kb on + strand, within Dshi_3503 at 3684.590 kb on + strand, within Dshi_3503 at 3684.625 kb on - strand, within Dshi_3503 at 3684.625 kb on - strand, within Dshi_3503 at 3684.625 kb on - strand, within Dshi_3503 at 3684.674 kb on - strand, within Dshi_3503 at 3684.750 kb on - strand, within Dshi_3503 at 3684.766 kb on - strand, within Dshi_3503 at 3684.802 kb on - strand, within Dshi_3503 at 3685.069 kb on + strand at 3685.158 kb on + strand at 3685.247 kb on + strand at 3685.293 kb on + strand at 3685.329 kb on - strand, within Dshi_3504 at 3685.330 kb on - strand, within Dshi_3504 at 3685.372 kb on + strand, within Dshi_3504 at 3685.432 kb on + strand, within Dshi_3504 at 3685.456 kb on + strand, within Dshi_3504 at 3685.572 kb on + strand, within Dshi_3504 at 3685.622 kb on - strand, within Dshi_3504 at 3685.709 kb on + strand, within Dshi_3504 at 3685.733 kb on + strand, within Dshi_3504 at 3685.734 kb on - strand, within Dshi_3504 at 3685.734 kb on - strand, within Dshi_3504 at 3685.736 kb on - strand, within Dshi_3504 at 3685.770 kb on + strand, within Dshi_3504 at 3685.814 kb on + strand, within Dshi_3504 at 3685.981 kb on + strand, within Dshi_3504 at 3685.989 kb on - strand, within Dshi_3504 at 3686.017 kb on - strand, within Dshi_3504 at 3686.045 kb on - strand at 3686.132 kb on + strand at 3686.134 kb on - strand at 3686.140 kb on - strand at 3686.213 kb on - strand, within Dshi_3505 at 3686.281 kb on - strand, within Dshi_3505 at 3686.342 kb on + strand, within Dshi_3505 at 3686.476 kb on + strand, within Dshi_3505 at 3686.494 kb on - strand, within Dshi_3505 at 3686.494 kb on - strand, within Dshi_3505 at 3686.496 kb on + strand, within Dshi_3505 at 3686.524 kb on + strand, within Dshi_3505 at 3686.569 kb on + strand at 3686.579 kb on + strand at 3686.584 kb on + strand at 3686.584 kb on + strand at 3686.667 kb on - strand, within Dshi_3506 at 3686.886 kb on - strand, within Dshi_3506 at 3686.886 kb on - strand, within Dshi_3506 at 3686.941 kb on - strand, within Dshi_3506
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.008 mM remove 3,684,459 - Dshi_3503 0.56 +0.4 3,684,496 + Dshi_3503 0.58 +1.6 3,684,507 + Dshi_3503 0.59 +2.9 3,684,590 + Dshi_3503 0.63 -2.7 3,684,625 - Dshi_3503 0.65 +1.4 3,684,625 - Dshi_3503 0.65 -1.1 3,684,625 - Dshi_3503 0.65 +3.1 3,684,674 - Dshi_3503 0.68 +2.0 3,684,750 - Dshi_3503 0.73 +0.9 3,684,766 - Dshi_3503 0.74 +2.4 3,684,802 - Dshi_3503 0.76 +1.1 3,685,069 + +0.4 3,685,158 + +1.8 3,685,247 + -0.5 3,685,293 + +1.5 3,685,329 - Dshi_3504 0.12 +0.8 3,685,330 - Dshi_3504 0.12 +1.3 3,685,372 + Dshi_3504 0.17 -0.1 3,685,432 + Dshi_3504 0.24 -1.5 3,685,456 + Dshi_3504 0.26 +0.5 3,685,572 + Dshi_3504 0.39 -1.1 3,685,622 - Dshi_3504 0.45 +2.2 3,685,709 + Dshi_3504 0.54 -1.1 3,685,733 + Dshi_3504 0.57 -1.1 3,685,734 - Dshi_3504 0.57 -0.7 3,685,734 - Dshi_3504 0.57 -1.5 3,685,736 - Dshi_3504 0.57 +0.1 3,685,770 + Dshi_3504 0.61 +3.7 3,685,814 + Dshi_3504 0.66 -1.3 3,685,981 + Dshi_3504 0.84 +1.3 3,685,989 - Dshi_3504 0.85 -0.5 3,686,017 - Dshi_3504 0.88 +1.9 3,686,045 - +1.6 3,686,132 + -0.6 3,686,134 - +1.5 3,686,140 - +0.5 3,686,213 - Dshi_3505 0.20 -1.2 3,686,281 - Dshi_3505 0.35 +1.0 3,686,342 + Dshi_3505 0.49 -0.1 3,686,476 + Dshi_3505 0.78 -2.3 3,686,494 - Dshi_3505 0.82 +0.1 3,686,494 - Dshi_3505 0.82 -0.1 3,686,496 + Dshi_3505 0.83 -3.1 3,686,524 + Dshi_3505 0.89 -2.1 3,686,569 + +0.4 3,686,579 + -0.6 3,686,584 + +1.9 3,686,584 + +0.9 3,686,667 - Dshi_3506 0.12 +0.3 3,686,886 - Dshi_3506 0.38 +0.6 3,686,886 - Dshi_3506 0.38 +1.2 3,686,941 - Dshi_3506 0.44 +3.1
Or see this region's nucleotide sequence