Experiment: m.b. Benzethonium chloride 0.008 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3502 and Dshi_3503 are separated by 8 nucleotides Dshi_3503 and Dshi_3504 overlap by 4 nucleotides Dshi_3504 and Dshi_3505 overlap by 4 nucleotides
Dshi_3502: Dshi_3502 - magnesium chelatase ATPase subunit I (RefSeq), at 3,682,486 to 3,683,490
_3502
Dshi_3503: Dshi_3503 - magnesium chelatase ATPase subunit D (RefSeq), at 3,683,499 to 3,685,220
_3503
Dshi_3504: Dshi_3504 - alpha/beta hydrolase fold (RefSeq), at 3,685,217 to 3,686,125
_3504
Dshi_3505: Dshi_3505 - transcriptional regulator, MarR family (RefSeq), at 3,686,122 to 3,686,574
_3505
Position (kb)
3683
3684
3685
3686 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 3682.546 kb on - strand at 3682.563 kb on - strand at 3682.587 kb on - strand, within Dshi_3502 at 3682.611 kb on + strand, within Dshi_3502 at 3682.660 kb on + strand, within Dshi_3502 at 3682.680 kb on - strand, within Dshi_3502 at 3682.680 kb on - strand, within Dshi_3502 at 3682.683 kb on + strand, within Dshi_3502 at 3682.712 kb on - strand, within Dshi_3502 at 3682.718 kb on - strand, within Dshi_3502 at 3682.777 kb on + strand, within Dshi_3502 at 3682.785 kb on - strand at 3682.821 kb on + strand, within Dshi_3502 at 3682.829 kb on - strand, within Dshi_3502 at 3682.887 kb on - strand, within Dshi_3502 at 3683.069 kb on - strand, within Dshi_3502 at 3683.204 kb on + strand, within Dshi_3502 at 3683.272 kb on - strand, within Dshi_3502 at 3683.284 kb on - strand, within Dshi_3502 at 3683.479 kb on + strand at 3683.487 kb on - strand at 3683.515 kb on + strand at 3683.657 kb on + strand at 3683.664 kb on + strand at 3683.758 kb on + strand, within Dshi_3503 at 3683.758 kb on + strand, within Dshi_3503 at 3683.758 kb on + strand, within Dshi_3503 at 3684.027 kb on + strand, within Dshi_3503 at 3684.459 kb on - strand, within Dshi_3503 at 3684.496 kb on + strand, within Dshi_3503 at 3684.507 kb on + strand, within Dshi_3503 at 3684.590 kb on + strand, within Dshi_3503 at 3684.625 kb on - strand, within Dshi_3503 at 3684.625 kb on - strand, within Dshi_3503 at 3684.625 kb on - strand, within Dshi_3503 at 3684.674 kb on - strand, within Dshi_3503 at 3684.750 kb on - strand, within Dshi_3503 at 3684.766 kb on - strand, within Dshi_3503 at 3684.802 kb on - strand, within Dshi_3503 at 3685.069 kb on + strand at 3685.158 kb on + strand at 3685.247 kb on + strand at 3685.293 kb on + strand at 3685.329 kb on - strand, within Dshi_3504 at 3685.330 kb on - strand, within Dshi_3504 at 3685.372 kb on + strand, within Dshi_3504 at 3685.432 kb on + strand, within Dshi_3504 at 3685.456 kb on + strand, within Dshi_3504 at 3685.572 kb on + strand, within Dshi_3504 at 3685.622 kb on - strand, within Dshi_3504 at 3685.709 kb on + strand, within Dshi_3504 at 3685.733 kb on + strand, within Dshi_3504 at 3685.734 kb on - strand, within Dshi_3504 at 3685.734 kb on - strand, within Dshi_3504 at 3685.736 kb on - strand, within Dshi_3504 at 3685.770 kb on + strand, within Dshi_3504 at 3685.814 kb on + strand, within Dshi_3504 at 3685.981 kb on + strand, within Dshi_3504 at 3685.989 kb on - strand, within Dshi_3504 at 3686.017 kb on - strand, within Dshi_3504 at 3686.045 kb on - strand at 3686.132 kb on + strand at 3686.134 kb on - strand at 3686.140 kb on - strand at 3686.213 kb on - strand, within Dshi_3505
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.008 mM remove 3,682,546 - +1.1 3,682,563 - +1.5 3,682,587 - Dshi_3502 0.10 +1.6 3,682,611 + Dshi_3502 0.12 +1.4 3,682,660 + Dshi_3502 0.17 -0.0 3,682,680 - Dshi_3502 0.19 +1.3 3,682,680 - Dshi_3502 0.19 +2.2 3,682,683 + Dshi_3502 0.20 +3.8 3,682,712 - Dshi_3502 0.22 +0.2 3,682,718 - Dshi_3502 0.23 +0.4 3,682,777 + Dshi_3502 0.29 +0.4 3,682,785 - -1.7 3,682,821 + Dshi_3502 0.33 +1.9 3,682,829 - Dshi_3502 0.34 +1.9 3,682,887 - Dshi_3502 0.40 +1.5 3,683,069 - Dshi_3502 0.58 +0.9 3,683,204 + Dshi_3502 0.71 +0.7 3,683,272 - Dshi_3502 0.78 +0.5 3,683,284 - Dshi_3502 0.79 +0.8 3,683,479 + +1.4 3,683,487 - +0.6 3,683,515 + +1.4 3,683,657 + +2.5 3,683,664 + +0.3 3,683,758 + Dshi_3503 0.15 +0.5 3,683,758 + Dshi_3503 0.15 +0.8 3,683,758 + Dshi_3503 0.15 -2.7 3,684,027 + Dshi_3503 0.31 +0.3 3,684,459 - Dshi_3503 0.56 +0.4 3,684,496 + Dshi_3503 0.58 +1.6 3,684,507 + Dshi_3503 0.59 +2.9 3,684,590 + Dshi_3503 0.63 -2.7 3,684,625 - Dshi_3503 0.65 +1.4 3,684,625 - Dshi_3503 0.65 -1.1 3,684,625 - Dshi_3503 0.65 +3.1 3,684,674 - Dshi_3503 0.68 +2.0 3,684,750 - Dshi_3503 0.73 +0.9 3,684,766 - Dshi_3503 0.74 +2.4 3,684,802 - Dshi_3503 0.76 +1.1 3,685,069 + +0.4 3,685,158 + +1.8 3,685,247 + -0.5 3,685,293 + +1.5 3,685,329 - Dshi_3504 0.12 +0.8 3,685,330 - Dshi_3504 0.12 +1.3 3,685,372 + Dshi_3504 0.17 -0.1 3,685,432 + Dshi_3504 0.24 -1.5 3,685,456 + Dshi_3504 0.26 +0.5 3,685,572 + Dshi_3504 0.39 -1.1 3,685,622 - Dshi_3504 0.45 +2.2 3,685,709 + Dshi_3504 0.54 -1.1 3,685,733 + Dshi_3504 0.57 -1.1 3,685,734 - Dshi_3504 0.57 -0.7 3,685,734 - Dshi_3504 0.57 -1.5 3,685,736 - Dshi_3504 0.57 +0.1 3,685,770 + Dshi_3504 0.61 +3.7 3,685,814 + Dshi_3504 0.66 -1.3 3,685,981 + Dshi_3504 0.84 +1.3 3,685,989 - Dshi_3504 0.85 -0.5 3,686,017 - Dshi_3504 0.88 +1.9 3,686,045 - +1.6 3,686,132 + -0.6 3,686,134 - +1.5 3,686,140 - +0.5 3,686,213 - Dshi_3505 0.20 -1.2
Or see this region's nucleotide sequence