Experiment: m.b. Benzethonium chloride 0.008 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3292 and Dshi_3293 are separated by 5 nucleotides Dshi_3293 and Dshi_3294 are separated by 12 nucleotides Dshi_3294 and Dshi_3295 are separated by 20 nucleotides Dshi_3295 and Dshi_3296 are separated by 3 nucleotides
Dshi_3292: Dshi_3292 - hypothetical protein (RefSeq), at 3,458,254 to 3,459,135
_3292
Dshi_3293: Dshi_3293 - hypothetical protein (RefSeq), at 3,459,141 to 3,459,959
_3293
Dshi_3294: Dshi_3294 - deoxyxylulose-5-phosphate synthase (RefSeq), at 3,459,972 to 3,461,903
_3294
Dshi_3295: Dshi_3295 - Polyprenyl synthetase (RefSeq), at 3,461,924 to 3,462,799
_3295
Dshi_3296: Dshi_3296 - exodeoxyribonuclease VII, small subunit (RefSeq), at 3,462,803 to 3,463,045
_3296
Position (kb)
3459
3460
3461
3462 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3459.029 kb on - strand, within Dshi_3292 at 3459.112 kb on - strand at 3459.147 kb on - strand at 3459.170 kb on + strand at 3459.227 kb on + strand, within Dshi_3293 at 3459.321 kb on + strand, within Dshi_3293 at 3459.414 kb on + strand, within Dshi_3293 at 3459.523 kb on - strand, within Dshi_3293 at 3459.555 kb on - strand, within Dshi_3293 at 3459.693 kb on - strand, within Dshi_3293 at 3459.712 kb on + strand, within Dshi_3293 at 3459.755 kb on + strand, within Dshi_3293 at 3459.853 kb on + strand, within Dshi_3293 at 3459.893 kb on + strand at 3460.183 kb on - strand, within Dshi_3294 at 3460.199 kb on + strand, within Dshi_3294 at 3460.434 kb on + strand, within Dshi_3294 at 3460.478 kb on - strand, within Dshi_3294 at 3460.693 kb on - strand, within Dshi_3294 at 3460.753 kb on - strand, within Dshi_3294 at 3460.764 kb on + strand, within Dshi_3294 at 3460.793 kb on + strand, within Dshi_3294 at 3460.927 kb on - strand, within Dshi_3294 at 3460.971 kb on - strand, within Dshi_3294 at 3460.998 kb on - strand, within Dshi_3294 at 3461.087 kb on - strand, within Dshi_3294 at 3461.143 kb on - strand, within Dshi_3294 at 3461.190 kb on - strand, within Dshi_3294 at 3461.266 kb on + strand, within Dshi_3294 at 3461.400 kb on + strand, within Dshi_3294 at 3461.400 kb on + strand, within Dshi_3294 at 3461.514 kb on - strand, within Dshi_3294 at 3461.531 kb on + strand, within Dshi_3294 at 3461.661 kb on + strand, within Dshi_3294 at 3461.701 kb on + strand, within Dshi_3294 at 3461.825 kb on + strand at 3461.833 kb on - strand at 3462.436 kb on + strand, within Dshi_3295 at 3462.836 kb on - strand, within Dshi_3296
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.008 mM remove 3,459,029 - Dshi_3292 0.88 +0.2 3,459,112 - +0.5 3,459,147 - +0.5 3,459,170 + +1.0 3,459,227 + Dshi_3293 0.11 -0.9 3,459,321 + Dshi_3293 0.22 -1.8 3,459,414 + Dshi_3293 0.33 -0.9 3,459,523 - Dshi_3293 0.47 -1.0 3,459,555 - Dshi_3293 0.51 -0.7 3,459,693 - Dshi_3293 0.67 +2.0 3,459,712 + Dshi_3293 0.70 -2.6 3,459,755 + Dshi_3293 0.75 +0.9 3,459,853 + Dshi_3293 0.87 +0.4 3,459,893 + +2.3 3,460,183 - Dshi_3294 0.11 -2.0 3,460,199 + Dshi_3294 0.12 +0.9 3,460,434 + Dshi_3294 0.24 +0.3 3,460,478 - Dshi_3294 0.26 +0.6 3,460,693 - Dshi_3294 0.37 -2.6 3,460,753 - Dshi_3294 0.40 +1.1 3,460,764 + Dshi_3294 0.41 +2.8 3,460,793 + Dshi_3294 0.42 -0.1 3,460,927 - Dshi_3294 0.49 -0.9 3,460,971 - Dshi_3294 0.52 +1.6 3,460,998 - Dshi_3294 0.53 +1.5 3,461,087 - Dshi_3294 0.58 +0.2 3,461,143 - Dshi_3294 0.61 +3.3 3,461,190 - Dshi_3294 0.63 +3.4 3,461,266 + Dshi_3294 0.67 +0.6 3,461,400 + Dshi_3294 0.74 +2.2 3,461,400 + Dshi_3294 0.74 -0.0 3,461,514 - Dshi_3294 0.80 +0.0 3,461,531 + Dshi_3294 0.81 +1.9 3,461,661 + Dshi_3294 0.87 +0.7 3,461,701 + Dshi_3294 0.89 +1.0 3,461,825 + -3.0 3,461,833 - -0.0 3,462,436 + Dshi_3295 0.58 -2.8 3,462,836 - Dshi_3296 0.14 +1.2
Or see this region's nucleotide sequence