Experiment: m.b. Benzethonium chloride 0.008 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2936 and Dshi_2937 are separated by 0 nucleotides Dshi_2937 and Dshi_2938 are separated by 286 nucleotides Dshi_2938 and Dshi_2939 are separated by 456 nucleotides
Dshi_2936: Dshi_2936 - ATP synthase F1, alpha subunit (RefSeq), at 3,092,718 to 3,094,256
_2936
Dshi_2937: Dshi_2937 - ATP synthase F1, delta subunit (RefSeq), at 3,094,257 to 3,094,817
_2937
Dshi_2938: Dshi_2938 - hypothetical protein (RefSeq), at 3,095,104 to 3,095,874
_2938
Dshi_2939: Dshi_2939 - ATP-dependent Clp protease, ATP-binding subunit clpA (RefSeq), at 3,096,331 to 3,098,658
_2939
Position (kb)
3095
3096 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3094.965 kb on - strand at 3094.971 kb on - strand at 3095.090 kb on - strand at 3095.090 kb on - strand at 3095.173 kb on - strand at 3095.173 kb on - strand at 3095.329 kb on + strand, within Dshi_2938 at 3095.482 kb on - strand, within Dshi_2938 at 3095.529 kb on + strand, within Dshi_2938 at 3095.537 kb on - strand, within Dshi_2938 at 3095.601 kb on + strand, within Dshi_2938 at 3095.719 kb on - strand, within Dshi_2938 at 3095.732 kb on + strand, within Dshi_2938 at 3095.755 kb on + strand, within Dshi_2938 at 3095.797 kb on + strand, within Dshi_2938 at 3095.797 kb on + strand, within Dshi_2938 at 3095.805 kb on - strand at 3095.805 kb on - strand at 3095.845 kb on + strand at 3095.860 kb on - strand at 3095.865 kb on - strand at 3095.872 kb on + strand at 3095.878 kb on + strand at 3095.878 kb on + strand at 3095.879 kb on + strand at 3095.879 kb on + strand at 3095.886 kb on - strand at 3095.897 kb on + strand at 3095.902 kb on + strand at 3095.923 kb on + strand at 3095.924 kb on + strand at 3095.931 kb on - strand at 3095.931 kb on - strand at 3095.932 kb on - strand at 3095.944 kb on + strand at 3095.955 kb on + strand at 3095.963 kb on - strand at 3095.994 kb on + strand at 3096.001 kb on + strand at 3096.084 kb on + strand at 3096.084 kb on + strand at 3096.086 kb on + strand at 3096.134 kb on + strand at 3096.142 kb on - strand at 3096.207 kb on - strand at 3096.242 kb on - strand at 3096.269 kb on - strand at 3096.277 kb on - strand at 3096.334 kb on - strand at 3096.350 kb on + strand at 3096.350 kb on + strand at 3096.358 kb on - strand at 3096.462 kb on + strand at 3096.553 kb on - strand at 3096.695 kb on - strand, within Dshi_2939 at 3096.794 kb on - strand, within Dshi_2939 at 3096.841 kb on + strand, within Dshi_2939
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.008 mM remove 3,094,965 - -0.5 3,094,971 - -2.2 3,095,090 - -1.3 3,095,090 - +0.0 3,095,173 - +1.6 3,095,173 - -0.0 3,095,329 + Dshi_2938 0.29 +1.5 3,095,482 - Dshi_2938 0.49 +2.6 3,095,529 + Dshi_2938 0.55 +1.0 3,095,537 - Dshi_2938 0.56 +3.1 3,095,601 + Dshi_2938 0.64 +1.6 3,095,719 - Dshi_2938 0.80 +0.7 3,095,732 + Dshi_2938 0.81 -0.0 3,095,755 + Dshi_2938 0.84 +2.1 3,095,797 + Dshi_2938 0.90 +1.1 3,095,797 + Dshi_2938 0.90 +0.6 3,095,805 - +1.7 3,095,805 - +2.5 3,095,845 + -1.3 3,095,860 - -0.0 3,095,865 - -0.2 3,095,872 + -0.2 3,095,878 + +1.1 3,095,878 + +0.4 3,095,879 + +1.2 3,095,879 + +1.0 3,095,886 - +1.4 3,095,897 + +0.9 3,095,902 + +1.3 3,095,923 + +1.4 3,095,924 + -0.8 3,095,931 - +1.7 3,095,931 - +2.4 3,095,932 - -2.0 3,095,944 + +0.9 3,095,955 + -1.3 3,095,963 - +0.8 3,095,994 + -2.3 3,096,001 + -2.3 3,096,084 + +2.2 3,096,084 + +0.9 3,096,086 + +0.6 3,096,134 + +1.3 3,096,142 - +0.3 3,096,207 - -0.9 3,096,242 - +2.0 3,096,269 - +0.7 3,096,277 - +0.2 3,096,334 - -2.0 3,096,350 + +2.3 3,096,350 + -0.6 3,096,358 - +1.7 3,096,462 + +1.7 3,096,553 - -1.1 3,096,695 - Dshi_2939 0.16 -0.3 3,096,794 - Dshi_2939 0.20 +2.5 3,096,841 + Dshi_2939 0.22 +1.4
Or see this region's nucleotide sequence