Experiment: m.b. Benzethonium chloride 0.008 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2854 and Dshi_2855 are separated by 208 nucleotides Dshi_2855 and Dshi_2856 are separated by 114 nucleotides Dshi_2856 and Dshi_2857 are separated by 85 nucleotides
Dshi_2854: Dshi_2854 - phospholipid/glycerol acyltransferase (RefSeq), at 3,011,938 to 3,013,380
_2854
Dshi_2855: Dshi_2855 - methylmalonyl-CoA mutase, large subunit (RefSeq), at 3,013,589 to 3,015,562
_2855
Dshi_2856: Dshi_2856 - hypothetical protein (RefSeq), at 3,015,677 to 3,016,192
_2856
Dshi_2857: Dshi_2857 - hypothetical protein (RefSeq), at 3,016,278 to 3,016,748
_2857
Position (kb)
3013
3014
3015
3016 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5
6 at 3012.617 kb on + strand, within Dshi_2854 at 3012.651 kb on + strand, within Dshi_2854 at 3012.664 kb on + strand, within Dshi_2854 at 3012.706 kb on - strand, within Dshi_2854 at 3012.751 kb on - strand, within Dshi_2854 at 3012.805 kb on - strand, within Dshi_2854 at 3012.817 kb on + strand, within Dshi_2854 at 3012.955 kb on - strand, within Dshi_2854 at 3012.965 kb on - strand, within Dshi_2854 at 3012.996 kb on + strand, within Dshi_2854 at 3013.067 kb on + strand, within Dshi_2854 at 3013.073 kb on + strand, within Dshi_2854 at 3013.075 kb on - strand, within Dshi_2854 at 3013.112 kb on + strand, within Dshi_2854 at 3013.238 kb on + strand at 3013.368 kb on + strand at 3013.390 kb on + strand at 3013.638 kb on + strand at 3013.750 kb on + strand at 3013.966 kb on - strand, within Dshi_2855 at 3013.997 kb on + strand, within Dshi_2855 at 3013.998 kb on + strand, within Dshi_2855 at 3013.998 kb on + strand, within Dshi_2855 at 3014.005 kb on - strand, within Dshi_2855 at 3014.005 kb on - strand, within Dshi_2855 at 3014.142 kb on - strand, within Dshi_2855 at 3014.316 kb on - strand, within Dshi_2855 at 3014.502 kb on + strand, within Dshi_2855 at 3014.520 kb on + strand, within Dshi_2855 at 3014.525 kb on + strand, within Dshi_2855 at 3014.544 kb on + strand, within Dshi_2855 at 3014.638 kb on + strand, within Dshi_2855 at 3014.790 kb on + strand, within Dshi_2855 at 3014.877 kb on + strand, within Dshi_2855 at 3014.881 kb on + strand, within Dshi_2855 at 3014.889 kb on - strand, within Dshi_2855 at 3015.006 kb on - strand, within Dshi_2855 at 3015.014 kb on + strand, within Dshi_2855 at 3015.110 kb on - strand, within Dshi_2855 at 3015.193 kb on - strand, within Dshi_2855 at 3015.395 kb on - strand at 3015.680 kb on + strand at 3015.805 kb on - strand, within Dshi_2856 at 3016.023 kb on + strand, within Dshi_2856 at 3016.219 kb on + strand at 3016.231 kb on + strand at 3016.236 kb on + strand at 3016.237 kb on + strand at 3016.237 kb on + strand at 3016.419 kb on - strand, within Dshi_2857 at 3016.465 kb on + strand, within Dshi_2857 at 3016.511 kb on + strand, within Dshi_2857
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.008 mM remove 3,012,617 + Dshi_2854 0.47 -0.0 3,012,651 + Dshi_2854 0.49 -0.2 3,012,664 + Dshi_2854 0.50 +0.3 3,012,706 - Dshi_2854 0.53 +1.5 3,012,751 - Dshi_2854 0.56 +0.6 3,012,805 - Dshi_2854 0.60 -1.2 3,012,817 + Dshi_2854 0.61 +0.4 3,012,955 - Dshi_2854 0.70 +0.4 3,012,965 - Dshi_2854 0.71 -0.7 3,012,996 + Dshi_2854 0.73 -2.5 3,013,067 + Dshi_2854 0.78 +0.6 3,013,073 + Dshi_2854 0.79 +1.1 3,013,075 - Dshi_2854 0.79 +0.5 3,013,112 + Dshi_2854 0.81 +0.6 3,013,238 + -0.5 3,013,368 + -0.3 3,013,390 + -0.0 3,013,638 + +4.6 3,013,750 + +2.8 3,013,966 - Dshi_2855 0.19 +3.0 3,013,997 + Dshi_2855 0.21 +3.7 3,013,998 + Dshi_2855 0.21 +4.8 3,013,998 + Dshi_2855 0.21 +4.1 3,014,005 - Dshi_2855 0.21 +4.1 3,014,005 - Dshi_2855 0.21 +3.7 3,014,142 - Dshi_2855 0.28 +5.2 3,014,316 - Dshi_2855 0.37 -2.6 3,014,502 + Dshi_2855 0.46 +2.0 3,014,520 + Dshi_2855 0.47 +4.0 3,014,525 + Dshi_2855 0.47 +3.9 3,014,544 + Dshi_2855 0.48 +2.9 3,014,638 + Dshi_2855 0.53 +3.2 3,014,790 + Dshi_2855 0.61 +4.2 3,014,877 + Dshi_2855 0.65 +3.5 3,014,881 + Dshi_2855 0.65 +3.8 3,014,889 - Dshi_2855 0.66 +6.3 3,015,006 - Dshi_2855 0.72 +4.3 3,015,014 + Dshi_2855 0.72 +3.0 3,015,110 - Dshi_2855 0.77 +3.9 3,015,193 - Dshi_2855 0.81 +5.4 3,015,395 - +4.3 3,015,680 + -3.5 3,015,805 - Dshi_2856 0.25 +0.4 3,016,023 + Dshi_2856 0.67 -1.4 3,016,219 + -0.5 3,016,231 + -0.5 3,016,236 + +0.1 3,016,237 + +0.1 3,016,237 + -0.0 3,016,419 - Dshi_2857 0.30 -0.4 3,016,465 + Dshi_2857 0.40 +0.1 3,016,511 + Dshi_2857 0.49 +1.0
Or see this region's nucleotide sequence