Experiment: m.b. Benzethonium chloride 0.008 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2823 and Dshi_2824 are separated by 103 nucleotides Dshi_2824 and Dshi_2825 are separated by 51 nucleotides
Dshi_2823: Dshi_2823 - aldo/keto reductase (RefSeq), at 2,979,098 to 2,980,144
_2823
Dshi_2824: Dshi_2824 - hypothetical protein (RefSeq), at 2,980,248 to 2,981,147
_2824
Dshi_2825: Dshi_2825 - 3-hydroxyacyl-CoA dehydrogenase NAD-binding (RefSeq), at 2,981,199 to 2,982,374
_2825
Position (kb)
2980
2981
2982 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2979.264 kb on + strand, within Dshi_2823 at 2979.289 kb on - strand, within Dshi_2823 at 2979.290 kb on - strand, within Dshi_2823 at 2979.329 kb on - strand, within Dshi_2823 at 2979.334 kb on - strand, within Dshi_2823 at 2979.455 kb on - strand, within Dshi_2823 at 2979.630 kb on + strand, within Dshi_2823 at 2979.660 kb on + strand, within Dshi_2823 at 2979.679 kb on + strand, within Dshi_2823 at 2979.692 kb on - strand, within Dshi_2823 at 2979.742 kb on + strand, within Dshi_2823 at 2979.893 kb on - strand, within Dshi_2823 at 2979.970 kb on + strand, within Dshi_2823 at 2979.989 kb on + strand, within Dshi_2823 at 2980.007 kb on - strand, within Dshi_2823 at 2980.042 kb on + strand at 2980.059 kb on + strand at 2980.109 kb on + strand at 2980.282 kb on + strand at 2980.342 kb on + strand, within Dshi_2824 at 2980.404 kb on + strand, within Dshi_2824 at 2980.568 kb on - strand, within Dshi_2824 at 2980.604 kb on - strand, within Dshi_2824 at 2980.626 kb on + strand, within Dshi_2824 at 2980.693 kb on - strand, within Dshi_2824 at 2980.714 kb on - strand, within Dshi_2824 at 2980.814 kb on - strand, within Dshi_2824 at 2980.847 kb on + strand, within Dshi_2824 at 2980.855 kb on - strand, within Dshi_2824 at 2980.922 kb on - strand, within Dshi_2824 at 2980.980 kb on + strand, within Dshi_2824 at 2981.099 kb on - strand at 2981.190 kb on + strand at 2981.196 kb on + strand at 2981.251 kb on - strand at 2981.378 kb on + strand, within Dshi_2825 at 2981.766 kb on - strand, within Dshi_2825 at 2981.770 kb on - strand, within Dshi_2825 at 2981.952 kb on + strand, within Dshi_2825 at 2982.040 kb on + strand, within Dshi_2825 at 2982.040 kb on + strand, within Dshi_2825 at 2982.043 kb on - strand, within Dshi_2825
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.008 mM remove 2,979,264 + Dshi_2823 0.16 +0.8 2,979,289 - Dshi_2823 0.18 +0.7 2,979,290 - Dshi_2823 0.18 -0.2 2,979,329 - Dshi_2823 0.22 +0.8 2,979,334 - Dshi_2823 0.23 +0.7 2,979,455 - Dshi_2823 0.34 +0.4 2,979,630 + Dshi_2823 0.51 +0.1 2,979,660 + Dshi_2823 0.54 -1.2 2,979,679 + Dshi_2823 0.55 -2.8 2,979,692 - Dshi_2823 0.57 +1.3 2,979,742 + Dshi_2823 0.62 -3.2 2,979,893 - Dshi_2823 0.76 +1.4 2,979,970 + Dshi_2823 0.83 +0.7 2,979,989 + Dshi_2823 0.85 -2.0 2,980,007 - Dshi_2823 0.87 +1.0 2,980,042 + +1.1 2,980,059 + -0.0 2,980,109 + -1.7 2,980,282 + +1.2 2,980,342 + Dshi_2824 0.10 +1.0 2,980,404 + Dshi_2824 0.17 -0.8 2,980,568 - Dshi_2824 0.36 +3.2 2,980,604 - Dshi_2824 0.40 +1.1 2,980,626 + Dshi_2824 0.42 +0.0 2,980,693 - Dshi_2824 0.49 +0.7 2,980,714 - Dshi_2824 0.52 -0.2 2,980,814 - Dshi_2824 0.63 +0.5 2,980,847 + Dshi_2824 0.67 +1.2 2,980,855 - Dshi_2824 0.67 -1.6 2,980,922 - Dshi_2824 0.75 +1.2 2,980,980 + Dshi_2824 0.81 -0.5 2,981,099 - +1.6 2,981,190 + +0.6 2,981,196 + -3.0 2,981,251 - +0.4 2,981,378 + Dshi_2825 0.15 -3.3 2,981,766 - Dshi_2825 0.48 -2.0 2,981,770 - Dshi_2825 0.49 -1.0 2,981,952 + Dshi_2825 0.64 -1.1 2,982,040 + Dshi_2825 0.72 +2.2 2,982,040 + Dshi_2825 0.72 +0.1 2,982,043 - Dshi_2825 0.72 -0.3
Or see this region's nucleotide sequence