Experiment: m.b. Benzethonium chloride 0.008 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1259 and Dshi_1260 are separated by 10 nucleotides Dshi_1260 and Dshi_1261 are separated by 89 nucleotides Dshi_1261 and Dshi_1262 are separated by 6 nucleotides
Dshi_1259: Dshi_1259 - heavy metal translocating P-type ATPase (RefSeq), at 1,305,092 to 1,307,596
_1259
Dshi_1260: Dshi_1260 - transcriptional regulator, MerR family (RefSeq), at 1,307,607 to 1,308,002
_1260
Dshi_1261: Dshi_1261 - sodium/glutamate symporter (RefSeq), at 1,308,092 to 1,309,300
_1261
Dshi_1262: Dshi_1262 - acriflavin resistance protein (RefSeq), at 1,309,307 to 1,312,360
_1262
Position (kb)
1308
1309
1310 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1307.131 kb on + strand, within Dshi_1259 at 1307.223 kb on + strand, within Dshi_1259 at 1307.252 kb on + strand, within Dshi_1259 at 1307.322 kb on - strand, within Dshi_1259 at 1307.353 kb on + strand at 1307.409 kb on + strand at 1307.653 kb on - strand, within Dshi_1260 at 1307.780 kb on - strand, within Dshi_1260 at 1307.781 kb on + strand, within Dshi_1260 at 1308.051 kb on - strand at 1308.070 kb on - strand at 1308.128 kb on + strand at 1308.133 kb on + strand at 1308.209 kb on - strand at 1308.270 kb on - strand, within Dshi_1261 at 1308.303 kb on + strand, within Dshi_1261 at 1308.418 kb on + strand, within Dshi_1261 at 1308.666 kb on + strand, within Dshi_1261 at 1308.676 kb on - strand, within Dshi_1261 at 1308.857 kb on + strand, within Dshi_1261 at 1308.902 kb on + strand, within Dshi_1261 at 1309.018 kb on - strand, within Dshi_1261 at 1309.061 kb on - strand, within Dshi_1261 at 1309.126 kb on - strand, within Dshi_1261 at 1309.293 kb on + strand at 1309.311 kb on - strand at 1309.648 kb on - strand, within Dshi_1262 at 1309.759 kb on + strand, within Dshi_1262 at 1309.778 kb on - strand, within Dshi_1262 at 1309.784 kb on + strand, within Dshi_1262 at 1310.053 kb on - strand, within Dshi_1262 at 1310.146 kb on - strand, within Dshi_1262 at 1310.168 kb on + strand, within Dshi_1262 at 1310.176 kb on - strand, within Dshi_1262 at 1310.176 kb on - strand, within Dshi_1262 at 1310.179 kb on - strand, within Dshi_1262
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.008 mM remove 1,307,131 + Dshi_1259 0.81 +0.3 1,307,223 + Dshi_1259 0.85 -0.2 1,307,252 + Dshi_1259 0.86 -1.6 1,307,322 - Dshi_1259 0.89 -2.5 1,307,353 + +1.0 1,307,409 + -1.4 1,307,653 - Dshi_1260 0.12 +0.1 1,307,780 - Dshi_1260 0.44 +0.4 1,307,781 + Dshi_1260 0.44 +0.1 1,308,051 - -0.8 1,308,070 - -0.3 1,308,128 + -0.8 1,308,133 + +1.9 1,308,209 - -0.3 1,308,270 - Dshi_1261 0.15 +0.3 1,308,303 + Dshi_1261 0.17 +1.0 1,308,418 + Dshi_1261 0.27 +0.6 1,308,666 + Dshi_1261 0.47 -0.5 1,308,676 - Dshi_1261 0.48 -1.5 1,308,857 + Dshi_1261 0.63 -2.0 1,308,902 + Dshi_1261 0.67 -0.3 1,309,018 - Dshi_1261 0.77 +0.3 1,309,061 - Dshi_1261 0.80 -1.7 1,309,126 - Dshi_1261 0.86 +0.3 1,309,293 + -0.5 1,309,311 - -0.4 1,309,648 - Dshi_1262 0.11 -1.7 1,309,759 + Dshi_1262 0.15 +1.5 1,309,778 - Dshi_1262 0.15 -1.3 1,309,784 + Dshi_1262 0.16 -1.3 1,310,053 - Dshi_1262 0.24 -1.6 1,310,146 - Dshi_1262 0.27 -0.5 1,310,168 + Dshi_1262 0.28 -1.1 1,310,176 - Dshi_1262 0.28 -1.0 1,310,176 - Dshi_1262 0.28 +0.6 1,310,179 - Dshi_1262 0.29 -0.5
Or see this region's nucleotide sequence