Experiment: m.b. Benzethonium chloride 0.008 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0977 and Dshi_0978 overlap by 4 nucleotides Dshi_0978 and Dshi_0979 are separated by 60 nucleotides Dshi_0979 and Dshi_0980 overlap by 4 nucleotides Dshi_0980 and Dshi_0981 are separated by 3 nucleotides
Dshi_0977: Dshi_0977 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase (RefSeq), at 998,735 to 1,000,003
_0977
Dshi_0978: Dshi_0978 - hypothetical protein (RefSeq), at 1,000,000 to 1,000,476
_0978
Dshi_0979: Dshi_0979 - Histidinol dehydrogenase (RefSeq), at 1,000,537 to 1,001,853
_0979
Dshi_0980: Dshi_0980 - hypothetical protein (RefSeq), at 1,001,850 to 1,002,329
_0980
Dshi_0981: Dshi_0981 - protein tyrosine phosphatase (RefSeq), at 1,002,333 to 1,002,788
_0981
Position (kb)
1000
1001
1002 Strain fitness (log2 ratio)
-1
0
1
2
3 at 1000.124 kb on - strand, within Dshi_0978 at 1000.144 kb on - strand, within Dshi_0978 at 1000.186 kb on - strand, within Dshi_0978 at 1000.271 kb on + strand, within Dshi_0978 at 1000.439 kb on + strand at 1001.934 kb on + strand, within Dshi_0980 at 1002.004 kb on + strand, within Dshi_0980 at 1002.010 kb on + strand, within Dshi_0980 at 1002.060 kb on + strand, within Dshi_0980 at 1002.167 kb on + strand, within Dshi_0980 at 1002.175 kb on - strand, within Dshi_0980 at 1002.190 kb on - strand, within Dshi_0980 at 1002.201 kb on + strand, within Dshi_0980 at 1002.459 kb on + strand, within Dshi_0981 at 1002.567 kb on + strand, within Dshi_0981 at 1002.611 kb on + strand, within Dshi_0981 at 1002.627 kb on - strand, within Dshi_0981 at 1002.659 kb on - strand, within Dshi_0981 at 1002.659 kb on - strand, within Dshi_0981 at 1002.687 kb on + strand, within Dshi_0981 at 1002.720 kb on + strand, within Dshi_0981 at 1002.723 kb on - strand, within Dshi_0981
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.008 mM remove 1,000,124 - Dshi_0978 0.26 -0.5 1,000,144 - Dshi_0978 0.30 +1.5 1,000,186 - Dshi_0978 0.39 +0.3 1,000,271 + Dshi_0978 0.57 -0.2 1,000,439 + +1.1 1,001,934 + Dshi_0980 0.17 +1.4 1,002,004 + Dshi_0980 0.32 -0.4 1,002,010 + Dshi_0980 0.33 +0.1 1,002,060 + Dshi_0980 0.44 +1.0 1,002,167 + Dshi_0980 0.66 +0.4 1,002,175 - Dshi_0980 0.68 -1.6 1,002,190 - Dshi_0980 0.71 -1.6 1,002,201 + Dshi_0980 0.73 -0.5 1,002,459 + Dshi_0981 0.28 +1.5 1,002,567 + Dshi_0981 0.51 +1.6 1,002,611 + Dshi_0981 0.61 +1.3 1,002,627 - Dshi_0981 0.64 -0.4 1,002,659 - Dshi_0981 0.71 +3.2 1,002,659 - Dshi_0981 0.71 -1.0 1,002,687 + Dshi_0981 0.78 +1.3 1,002,720 + Dshi_0981 0.85 +2.0 1,002,723 - Dshi_0981 0.86 +1.3
Or see this region's nucleotide sequence