Experiment: m.b. Benzethonium chloride 0.008 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0490 and Dshi_0491 are separated by 142 nucleotides Dshi_0491 and Dshi_0492 are separated by 58 nucleotides Dshi_0492 and Dshi_0493 overlap by 4 nucleotides
Dshi_0490: Dshi_0490 - hypothetical protein (RefSeq), at 475,571 to 475,996
_0490
Dshi_0491: Dshi_0491 - putative sulfonate/nitrate transport system substrate-binding protein (RefSeq), at 476,139 to 477,122
_0491
Dshi_0492: Dshi_0492 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 477,181 to 478,005
_0492
Dshi_0493: Dshi_0493 - ABC transporter related (RefSeq), at 478,002 to 478,751
_0493
Position (kb)
476
477
478 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2
3 at 475.146 kb on + strand at 475.147 kb on - strand at 475.154 kb on - strand at 475.154 kb on - strand at 475.154 kb on - strand at 475.166 kb on + strand at 475.222 kb on - strand at 475.234 kb on + strand at 475.251 kb on - strand at 475.306 kb on + strand at 475.306 kb on + strand at 475.314 kb on + strand at 475.314 kb on - strand at 475.324 kb on + strand at 475.324 kb on + strand at 475.324 kb on + strand at 475.327 kb on - strand at 475.332 kb on - strand at 475.391 kb on - strand at 475.474 kb on - strand at 475.474 kb on - strand at 475.512 kb on + strand at 475.515 kb on - strand at 475.515 kb on - strand at 475.537 kb on + strand at 475.538 kb on - strand at 475.549 kb on - strand at 475.564 kb on - strand at 475.573 kb on + strand at 475.592 kb on + strand at 475.803 kb on - strand, within Dshi_0490 at 475.814 kb on - strand, within Dshi_0490 at 475.865 kb on - strand, within Dshi_0490 at 475.870 kb on - strand, within Dshi_0490 at 475.936 kb on + strand, within Dshi_0490 at 475.944 kb on - strand, within Dshi_0490 at 475.955 kb on + strand at 475.957 kb on - strand at 476.013 kb on - strand at 476.018 kb on + strand at 476.185 kb on - strand at 476.274 kb on + strand, within Dshi_0491 at 476.279 kb on + strand, within Dshi_0491 at 476.340 kb on - strand, within Dshi_0491 at 476.355 kb on - strand, within Dshi_0491 at 476.367 kb on + strand, within Dshi_0491 at 476.457 kb on - strand, within Dshi_0491 at 476.475 kb on - strand, within Dshi_0491 at 476.485 kb on - strand, within Dshi_0491 at 476.586 kb on + strand, within Dshi_0491 at 476.596 kb on + strand, within Dshi_0491 at 476.604 kb on - strand, within Dshi_0491 at 476.645 kb on + strand, within Dshi_0491 at 476.711 kb on - strand, within Dshi_0491 at 476.811 kb on - strand, within Dshi_0491 at 476.836 kb on + strand, within Dshi_0491 at 476.836 kb on + strand, within Dshi_0491 at 476.923 kb on - strand, within Dshi_0491 at 476.966 kb on - strand, within Dshi_0491 at 477.003 kb on - strand, within Dshi_0491 at 477.072 kb on + strand at 477.086 kb on + strand at 477.091 kb on + strand at 477.139 kb on + strand at 477.147 kb on - strand at 477.172 kb on + strand at 477.182 kb on + strand at 477.224 kb on - strand at 477.241 kb on + strand at 477.251 kb on + strand at 477.255 kb on - strand at 477.341 kb on + strand, within Dshi_0492 at 477.363 kb on + strand, within Dshi_0492 at 477.372 kb on - strand, within Dshi_0492 at 477.425 kb on + strand, within Dshi_0492 at 477.469 kb on - strand, within Dshi_0492 at 477.507 kb on - strand at 477.522 kb on + strand, within Dshi_0492 at 477.525 kb on - strand, within Dshi_0492 at 477.569 kb on - strand, within Dshi_0492 at 477.596 kb on + strand, within Dshi_0492 at 477.618 kb on + strand, within Dshi_0492 at 477.645 kb on + strand, within Dshi_0492 at 477.669 kb on + strand, within Dshi_0492 at 477.722 kb on - strand, within Dshi_0492 at 477.766 kb on + strand, within Dshi_0492 at 477.785 kb on + strand, within Dshi_0492 at 477.888 kb on - strand, within Dshi_0492 at 477.888 kb on - strand, within Dshi_0492 at 477.900 kb on - strand, within Dshi_0492 at 477.907 kb on + strand, within Dshi_0492 at 477.910 kb on + strand, within Dshi_0492 at 477.936 kb on + strand at 477.944 kb on - strand at 477.979 kb on + strand at 477.979 kb on + strand at 477.979 kb on + strand at 477.987 kb on - strand at 477.987 kb on - strand at 478.016 kb on + strand at 478.019 kb on + strand at 478.045 kb on + strand at 478.046 kb on - strand at 478.103 kb on + strand, within Dshi_0493 at 478.111 kb on - strand, within Dshi_0493
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.008 mM remove 475,146 + +0.5 475,147 - -1.2 475,154 - -2.3 475,154 - -0.4 475,154 - +0.4 475,166 + +0.0 475,222 - +0.1 475,234 + -1.1 475,251 - -0.0 475,306 + -0.0 475,306 + -0.5 475,314 + -1.0 475,314 - -0.2 475,324 + +1.6 475,324 + -0.3 475,324 + -0.7 475,327 - +0.1 475,332 - -0.8 475,391 - -0.6 475,474 - -2.6 475,474 - +1.0 475,512 + -2.3 475,515 - +2.8 475,515 - -0.3 475,537 + +0.2 475,538 - +0.1 475,549 - -1.2 475,564 - +0.1 475,573 + +1.6 475,592 + -2.0 475,803 - Dshi_0490 0.54 -0.6 475,814 - Dshi_0490 0.57 -2.0 475,865 - Dshi_0490 0.69 +0.5 475,870 - Dshi_0490 0.70 -0.0 475,936 + Dshi_0490 0.86 +0.4 475,944 - Dshi_0490 0.88 +0.5 475,955 + -1.0 475,957 - +2.1 476,013 - -0.0 476,018 + -0.6 476,185 - -1.0 476,274 + Dshi_0491 0.14 -1.0 476,279 + Dshi_0491 0.14 -2.6 476,340 - Dshi_0491 0.20 +0.8 476,355 - Dshi_0491 0.22 +0.5 476,367 + Dshi_0491 0.23 +3.4 476,457 - Dshi_0491 0.32 -1.9 476,475 - Dshi_0491 0.34 -0.9 476,485 - Dshi_0491 0.35 -0.0 476,586 + Dshi_0491 0.45 -1.0 476,596 + Dshi_0491 0.46 -0.7 476,604 - Dshi_0491 0.47 -0.0 476,645 + Dshi_0491 0.51 -0.3 476,711 - Dshi_0491 0.58 +0.2 476,811 - Dshi_0491 0.68 +0.6 476,836 + Dshi_0491 0.71 -2.3 476,836 + Dshi_0491 0.71 -4.8 476,923 - Dshi_0491 0.80 -3.0 476,966 - Dshi_0491 0.84 -2.8 477,003 - Dshi_0491 0.88 -0.1 477,072 + -0.3 477,086 + +0.6 477,091 + +0.7 477,139 + +0.7 477,147 - -1.0 477,172 + -2.3 477,182 + +0.2 477,224 - -0.6 477,241 + +1.6 477,251 + -3.6 477,255 - +1.3 477,341 + Dshi_0492 0.19 -0.0 477,363 + Dshi_0492 0.22 -1.7 477,372 - Dshi_0492 0.23 -0.5 477,425 + Dshi_0492 0.30 -2.6 477,469 - Dshi_0492 0.35 -1.3 477,507 - -0.0 477,522 + Dshi_0492 0.41 -2.4 477,525 - Dshi_0492 0.42 -0.1 477,569 - Dshi_0492 0.47 +0.4 477,596 + Dshi_0492 0.50 -1.0 477,618 + Dshi_0492 0.53 +0.2 477,645 + Dshi_0492 0.56 -1.0 477,669 + Dshi_0492 0.59 -1.8 477,722 - Dshi_0492 0.66 -3.0 477,766 + Dshi_0492 0.71 +0.4 477,785 + Dshi_0492 0.73 -0.6 477,888 - Dshi_0492 0.86 -0.6 477,888 - Dshi_0492 0.86 +0.3 477,900 - Dshi_0492 0.87 +0.5 477,907 + Dshi_0492 0.88 +0.8 477,910 + Dshi_0492 0.88 +0.8 477,936 + +1.0 477,944 - +1.1 477,979 + -1.0 477,979 + +1.5 477,979 + -0.0 477,987 - +0.8 477,987 - +0.4 478,016 + +0.3 478,019 + -1.2 478,045 + +0.6 478,046 - -1.6 478,103 + Dshi_0493 0.13 -0.3 478,111 - Dshi_0493 0.15 +0.3
Or see this region's nucleotide sequence