Experiment: m.b. Benzethonium chloride 0.008 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0443 and Dshi_0444 are separated by 37 nucleotides Dshi_0444 and Dshi_0445 are separated by 33 nucleotides Dshi_0445 and Dshi_0446 are separated by 130 nucleotides Dshi_0446 and Dshi_0447 are separated by 1 nucleotides
Dshi_0443: Dshi_0443 - H+transporting two-sector ATPase gamma subunit (RefSeq), at 432,740 to 433,687
_0443
Dshi_0444: Dshi_0444 - hypothetical protein (RefSeq), at 433,725 to 434,012
_0444
Dshi_0445: Dshi_0445 - hypothetical protein (RefSeq), at 434,046 to 434,438
_0445
Dshi_0446: Dshi_0446 - putative signal transduction protein with CBS domains (RefSeq), at 434,569 to 434,979
_0446
Dshi_0447: Dshi_0447 - transcriptional regulator, Crp/Fnr family (RefSeq), at 434,981 to 435,769
_0447
Position (kb)
434
435 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 433.113 kb on - strand, within Dshi_0443 at 433.193 kb on + strand, within Dshi_0443 at 433.331 kb on + strand, within Dshi_0443 at 433.368 kb on + strand, within Dshi_0443 at 433.384 kb on + strand, within Dshi_0443 at 433.476 kb on + strand, within Dshi_0443 at 433.522 kb on + strand, within Dshi_0443 at 433.558 kb on + strand, within Dshi_0443 at 433.600 kb on + strand at 433.625 kb on + strand at 433.652 kb on + strand at 433.673 kb on + strand at 433.673 kb on + strand at 433.681 kb on - strand at 433.769 kb on + strand, within Dshi_0444 at 433.784 kb on + strand, within Dshi_0444 at 433.784 kb on + strand, within Dshi_0444 at 433.807 kb on + strand, within Dshi_0444 at 433.831 kb on + strand, within Dshi_0444 at 433.902 kb on - strand, within Dshi_0444 at 433.917 kb on + strand, within Dshi_0444 at 433.918 kb on - strand, within Dshi_0444 at 433.952 kb on + strand, within Dshi_0444 at 433.960 kb on - strand, within Dshi_0444 at 433.989 kb on + strand at 433.990 kb on + strand at 434.011 kb on + strand at 434.024 kb on - strand at 434.030 kb on - strand at 434.058 kb on + strand at 434.117 kb on - strand, within Dshi_0445 at 434.150 kb on + strand, within Dshi_0445 at 434.159 kb on + strand, within Dshi_0445 at 434.167 kb on - strand, within Dshi_0445 at 434.182 kb on + strand, within Dshi_0445 at 434.205 kb on + strand, within Dshi_0445 at 434.213 kb on - strand, within Dshi_0445 at 434.217 kb on + strand, within Dshi_0445 at 434.217 kb on + strand, within Dshi_0445 at 434.264 kb on + strand, within Dshi_0445 at 434.270 kb on - strand, within Dshi_0445 at 434.291 kb on - strand, within Dshi_0445 at 434.301 kb on + strand, within Dshi_0445 at 434.322 kb on - strand, within Dshi_0445 at 434.327 kb on + strand, within Dshi_0445 at 434.376 kb on - strand, within Dshi_0445 at 434.418 kb on + strand at 434.447 kb on + strand at 434.447 kb on + strand at 434.447 kb on + strand at 434.454 kb on - strand at 434.454 kb on - strand at 434.455 kb on - strand at 434.455 kb on - strand at 434.455 kb on - strand at 434.457 kb on + strand at 434.474 kb on + strand at 434.496 kb on + strand at 434.524 kb on + strand at 434.533 kb on - strand at 434.553 kb on + strand at 434.594 kb on + strand at 434.598 kb on + strand at 434.599 kb on + strand at 434.625 kb on + strand, within Dshi_0446 at 434.644 kb on - strand, within Dshi_0446 at 434.683 kb on + strand, within Dshi_0446 at 434.727 kb on + strand, within Dshi_0446 at 434.763 kb on + strand, within Dshi_0446 at 434.780 kb on - strand, within Dshi_0446 at 434.840 kb on - strand, within Dshi_0446 at 434.887 kb on + strand, within Dshi_0446 at 434.945 kb on + strand at 435.025 kb on + strand at 435.067 kb on + strand, within Dshi_0447 at 435.082 kb on + strand, within Dshi_0447 at 435.139 kb on - strand, within Dshi_0447 at 435.251 kb on + strand, within Dshi_0447 at 435.259 kb on - strand, within Dshi_0447 at 435.278 kb on + strand, within Dshi_0447 at 435.301 kb on + strand, within Dshi_0447 at 435.301 kb on + strand, within Dshi_0447 at 435.301 kb on + strand, within Dshi_0447 at 435.309 kb on - strand, within Dshi_0447 at 435.309 kb on - strand, within Dshi_0447 at 435.424 kb on + strand, within Dshi_0447 at 435.427 kb on - strand, within Dshi_0447 at 435.427 kb on - strand, within Dshi_0447 at 435.427 kb on - strand, within Dshi_0447
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.008 mM remove 433,113 - Dshi_0443 0.39 -0.8 433,193 + Dshi_0443 0.48 +0.6 433,331 + Dshi_0443 0.62 -1.4 433,368 + Dshi_0443 0.66 -0.8 433,384 + Dshi_0443 0.68 -0.1 433,476 + Dshi_0443 0.78 -0.8 433,522 + Dshi_0443 0.82 -0.6 433,558 + Dshi_0443 0.86 +1.5 433,600 + -1.6 433,625 + +1.3 433,652 + +0.6 433,673 + +0.3 433,673 + -2.6 433,681 - -0.0 433,769 + Dshi_0444 0.15 -2.0 433,784 + Dshi_0444 0.20 +2.8 433,784 + Dshi_0444 0.20 +0.3 433,807 + Dshi_0444 0.28 -0.3 433,831 + Dshi_0444 0.37 +0.6 433,902 - Dshi_0444 0.61 +1.2 433,917 + Dshi_0444 0.67 +0.2 433,918 - Dshi_0444 0.67 +0.1 433,952 + Dshi_0444 0.79 +0.2 433,960 - Dshi_0444 0.82 +0.6 433,989 + -2.3 433,990 + +0.2 434,011 + +0.6 434,024 - -1.9 434,030 - +0.3 434,058 + -1.2 434,117 - Dshi_0445 0.18 -0.9 434,150 + Dshi_0445 0.26 +0.4 434,159 + Dshi_0445 0.29 -0.7 434,167 - Dshi_0445 0.31 +0.1 434,182 + Dshi_0445 0.35 -0.1 434,205 + Dshi_0445 0.40 +0.8 434,213 - Dshi_0445 0.42 +0.3 434,217 + Dshi_0445 0.44 -2.0 434,217 + Dshi_0445 0.44 -3.0 434,264 + Dshi_0445 0.55 +0.4 434,270 - Dshi_0445 0.57 +1.0 434,291 - Dshi_0445 0.62 -0.9 434,301 + Dshi_0445 0.65 -0.8 434,322 - Dshi_0445 0.70 -1.6 434,327 + Dshi_0445 0.72 +0.3 434,376 - Dshi_0445 0.84 -0.1 434,418 + +0.1 434,447 + -0.9 434,447 + +0.9 434,447 + -0.6 434,454 - +0.6 434,454 - -1.3 434,455 - +0.4 434,455 - -0.1 434,455 - +1.0 434,457 + +0.0 434,474 + +0.2 434,496 + -0.4 434,524 + +1.4 434,533 - +0.7 434,553 + -3.7 434,594 + -0.1 434,598 + -2.0 434,599 + -2.0 434,625 + Dshi_0446 0.14 -0.0 434,644 - Dshi_0446 0.18 +0.1 434,683 + Dshi_0446 0.28 -1.6 434,727 + Dshi_0446 0.38 +0.2 434,763 + Dshi_0446 0.47 +0.5 434,780 - Dshi_0446 0.51 -1.3 434,840 - Dshi_0446 0.66 -2.0 434,887 + Dshi_0446 0.77 -0.0 434,945 + +1.9 435,025 + -0.6 435,067 + Dshi_0447 0.11 -1.6 435,082 + Dshi_0447 0.13 -2.0 435,139 - Dshi_0447 0.20 -0.4 435,251 + Dshi_0447 0.34 +0.4 435,259 - Dshi_0447 0.35 -2.0 435,278 + Dshi_0447 0.38 -0.7 435,301 + Dshi_0447 0.41 +1.1 435,301 + Dshi_0447 0.41 +0.6 435,301 + Dshi_0447 0.41 -1.2 435,309 - Dshi_0447 0.42 -0.0 435,309 - Dshi_0447 0.42 +1.1 435,424 + Dshi_0447 0.56 +0.5 435,427 - Dshi_0447 0.57 +0.1 435,427 - Dshi_0447 0.57 +1.9 435,427 - Dshi_0447 0.57 +0.2
Or see this region's nucleotide sequence