Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3900

Experiment: BHIS with Vancomycin 0.016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Vancomycin 0.016 mg/ml
5,070,931	-		BT3898	0.69	+0.3
5,070,931	-		BT3898	0.69	-0.4
5,070,994	+		BT3898	0.72	-0.5
5,071,034	-		BT3898	0.74	+0.3
5,071,034	-		BT3898	0.74	-0.5
5,071,034	-		BT3898	0.74	+1.9
5,071,078	+		BT3898	0.77	-0.4
5,071,081	+		BT3898	0.77	-2.7
5,071,081	+		BT3898	0.77	-0.6
5,071,082	-		BT3898	0.77	+1.1
5,071,087	+		BT3898	0.77	-0.1
5,071,087	+		BT3898	0.77	+0.2
5,071,087	+		BT3898	0.77	-1.0
5,071,088	-		BT3898	0.77	+1.5
5,071,088	-		BT3898	0.77	+1.1
5,071,135	+		BT3898	0.80	+0.1
5,071,141	-		BT3898	0.80	-1.1
5,071,178	-		BT3898	0.82	-1.9
5,071,193	+		BT3898	0.83	-0.6
5,071,197	+		BT3898	0.83	-1.5
5,071,220	-		BT3898	0.85	+0.2
5,071,382	-				+1.1
5,071,382	-				-1.4
5,071,445	+				+0.7
5,071,501	-				-2.4
5,071,501	-				-0.3
5,071,540	-				-0.8
5,071,540	-				-0.3
5,071,571	+		BT3899	0.14	-0.3
5,071,572	-		BT3899	0.15	+0.5
5,071,575	+		BT3899	0.16	-0.8
5,071,614	-		BT3899	0.26	-0.4
5,071,683	-		BT3899	0.45	+2.1
5,071,683	-		BT3899	0.45	+1.9
5,071,693	+		BT3899	0.48	+1.1
5,071,693	+		BT3899	0.48	+1.8
5,071,694	-		BT3899	0.48	+0.7
5,071,703	+		BT3899	0.51	+0.0
5,071,710	+		BT3899	0.52	+0.8
5,071,711	-		BT3899	0.53	+0.9
5,071,729	+		BT3899	0.58	-2.0
5,071,772	+		BT3899	0.69	+0.9
5,071,772	+		BT3899	0.69	+0.8
5,071,774	+		BT3899	0.70	-0.5
5,071,775	-		BT3899	0.70	+1.4
5,071,816	-		BT3899	0.81	+0.1
5,071,843	+		BT3899	0.89	+0.8
5,071,955	+		BT3900	0.31	+0.7
5,071,955	+		BT3900	0.31	-2.1
5,071,960	-		BT3900	0.33	-2.4
5,072,046	+		BT3900	0.70	+0.1
5,072,079	-		BT3900	0.84	+2.0
5,072,097	-				-0.6
5,072,152	+				+0.3
5,072,158	-				+0.2
5,072,225	+				+1.0
5,072,226	-				-0.1
5,072,228	+				-0.2
5,072,229	-				-1.0
5,072,229	-				+0.3
5,072,321	-		BT3901	0.14	+0.5
5,072,353	+		BT3901	0.19	+0.2
5,072,354	-		BT3901	0.19	+3.1
5,072,358	+		BT3901	0.19	+0.2
5,072,363	-		BT3901	0.20	+1.2
5,072,409	+		BT3901	0.27	-0.9
5,072,409	+		BT3901	0.27	-1.6
5,072,410	-		BT3901	0.27	+0.3
5,072,452	+		BT3901	0.34	-1.0
5,072,452	+		BT3901	0.34	-2.0
5,072,452	+		BT3901	0.34	-0.9
5,072,453	-		BT3901	0.34	+0.3
5,072,453	-		BT3901	0.34	+1.1
5,072,461	+		BT3901	0.35	-3.2
5,072,509	+		BT3901	0.42	-0.5
5,072,509	+		BT3901	0.42	-0.9
5,072,510	-		BT3901	0.42	+1.4
5,072,518	+		BT3901	0.44	-0.6
5,072,587	-		BT3901	0.54	+1.1
5,072,592	+		BT3901	0.55	-1.4
5,072,633	+		BT3901	0.61	-2.5
5,072,770	+		BT3901	0.82	-2.5
5,072,848	+				+2.7
5,072,860	-				+0.4
5,072,863	-				-0.5
5,072,943	-				+0.3
5,072,958	-				-2.3
5,072,959	+				+0.4
5,072,960	-				-0.1
5,072,960	-				+0.9
5,072,983	-				-0.7
5,072,983	-				-0.7
5,073,002	-				+1.3
5,073,056	+				-0.8
5,073,057	-				-0.6
5,073,057	-				-0.9
5,073,058	+				-1.8
5,073,067	-				+0.1
5,073,104	-				-1.2
5,073,104	-				+0.1