Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3117

Experiment: BHIS with Vancomycin 0.016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Vancomycin 0.016 mg/ml
3,972,315	+				-0.9
3,972,328	+				+1.4
3,972,335	+				-0.2
3,972,335	+				+0.7
3,972,340	+				+1.4
3,972,340	+				-0.4
3,972,406	+				+0.6
3,972,406	+				-0.5
3,972,412	+				-0.4
3,972,441	+		BT3117	0.12	+0.4
3,972,487	+		BT3117	0.17	-2.6
3,972,487	+		BT3117	0.17	-2.9
3,972,502	+		BT3117	0.19	+0.3
3,972,711	+		BT3117	0.42	-0.3
3,972,929	+		BT3117	0.66	+1.4
3,973,143	+		BT3117	0.89	-1.9
3,974,073	+				-1.2
3,974,083	+				-0.9
3,974,122	+				+0.2
3,974,123	-				+0.4
3,974,127	-				-0.4
3,974,195	+		BT3119	0.13	-0.6
3,974,195	+		BT3119	0.13	+3.0
3,974,196	-		BT3119	0.13	+0.7
3,974,206	+		BT3119	0.15	-0.2