Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2940

Experiment: BHIS with Vancomycin 0.016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Vancomycin 0.016 mg/ml
3,697,034	+		BT2939	0.30	-1.4
3,697,053	+				+1.4
3,697,053	+		BT2939	0.32	+0.4
3,697,054	-		BT2939	0.32	-0.2
3,697,077	-		BT2939	0.35	+1.2
3,697,077	-		BT2939	0.35	+0.8
3,697,078	+		BT2939	0.35	-2.3
3,697,079	-		BT2939	0.35	-0.0
3,697,395	-		BT2939	0.69	-0.9
3,697,395	-		BT2939	0.69	-2.5
3,697,401	-		BT2939	0.70	+0.2
3,697,472	-		BT2939	0.78	-0.8
3,697,499	+		BT2939	0.81	-2.4
3,697,523	+		BT2939	0.83	+0.2
3,697,548	-		BT2939	0.86	-0.1
3,697,556	+		BT2939	0.87	-1.0
3,697,556	+		BT2939	0.87	-2.7
3,697,556	+		BT2939	0.87	-1.0
3,697,604	+				-2.6
3,697,606	+				+0.4
3,697,607	-				-1.8
3,697,607	-				-1.5
3,697,641	+				+1.7
3,697,643	+				-0.6
3,697,673	+				-1.4
3,697,710	+				-0.5
3,697,743	-				+0.0
3,697,745	-				-0.1
3,697,766	+				-3.1
3,697,774	+				-1.1
3,697,774	+				-2.6
3,697,892	+				-1.3
3,697,893	-				-0.2
3,697,896	+				-1.2
3,697,947	+				-3.0
3,698,002	+				-1.5
3,698,019	-		BT2940	0.11	-0.4
3,698,051	-		BT2940	0.14	-0.9
3,698,085	+		BT2940	0.17	-2.0
3,698,086	-		BT2940	0.17	-0.4
3,698,185	+		BT2940	0.26	-0.9
3,698,281	+		BT2940	0.35	+0.4
3,698,282	-		BT2940	0.35	-2.4
3,698,332	+		BT2940	0.39	+0.1
3,698,401	+		BT2940	0.46	-0.6
3,698,403	+		BT2940	0.46	+2.5
3,698,404	-		BT2940	0.46	-0.6
3,698,496	+		BT2940	0.54	+0.1
3,698,497	-		BT2940	0.54	-1.1
3,698,497	-		BT2940	0.54	-1.3
3,698,521	+		BT2940	0.57	-2.2
3,698,521	+		BT2940	0.57	-0.6
3,698,522	-		BT2940	0.57	+1.4
3,698,714	+		BT2940	0.74	-1.1
3,698,765	+		BT2940	0.79	-0.5
3,698,766	-		BT2940	0.79	+0.8
3,698,766	-		BT2940	0.79	-1.1
3,698,843	+		BT2940	0.86	-1.9
3,698,844	-		BT2940	0.86	+1.4
3,698,844	-		BT2940	0.86	-0.6
3,698,844	-		BT2940	0.86	-1.1
3,698,844	-		BT2940	0.86	-0.2
3,698,845	+		BT2940	0.86	-0.4
3,698,847	+		BT2940	0.86	-2.5
3,698,914	+				-1.7
3,698,914	+				-3.7
3,698,919	-				-0.3
3,698,919	-				+3.2
3,698,954	+				-0.2
3,698,994	+				-2.6
3,699,026	+				-0.4
3,699,027	-				+3.4
3,699,032	+				-1.8
3,699,121	-				+0.6
3,699,147	+				+0.1
3,699,148	-				-0.8
3,699,163	-				+0.8
3,699,246	+				-0.1
3,699,246	+				-0.3
3,699,246	+				-0.6
3,699,246	+				-2.3
3,699,247	-				-2.1
3,699,287	-				-0.9
3,699,294	+				-1.3
3,699,294	+				-0.9
3,699,294	+				+0.2
3,699,397	+		BT2941	0.12	+0.4
3,699,487	-		BT2941	0.15	-1.2
3,699,561	+		BT2941	0.17	-0.6
3,699,561	+		BT2941	0.17	-1.7
3,699,562	-		BT2941	0.17	+0.9
3,699,562	-		BT2941	0.17	-0.7
3,699,566	+		BT2941	0.17	-1.5
3,699,567	-		BT2941	0.17	-0.6
3,699,572	+		BT2941	0.18	-1.3
3,699,604	-		BT2941	0.19	+0.2
3,699,784	+		BT2941	0.24	-3.8
3,699,824	+		BT2941	0.25	-0.9
3,699,825	-		BT2941	0.25	-0.9
3,699,825	-		BT2941	0.25	-0.7
3,699,831	+		BT2941	0.26	-0.4
3,699,873	+		BT2941	0.27	-0.1
3,699,873	+		BT2941	0.27	+0.6
3,699,874	-		BT2941	0.27	-0.7
3,699,875	+		BT2941	0.27	-1.2
3,699,876	-		BT2941	0.27	-1.7