Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2749

Experiment: BHIS with Vancomycin 0.016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Vancomycin 0.016 mg/ml
3,406,324	-				-0.9
3,406,324	-				-3.0
3,406,333	-				-0.5
3,406,416	+				+1.9
3,406,416	+				-1.8
3,406,417	-				+0.3
3,406,450	-				-3.1
3,406,452	-				-2.9
3,406,452	-				-2.1
3,406,455	-				-4.2
3,406,542	-				-3.1
3,406,657	+		BT2749	0.12	-1.1
3,406,657	+		BT2749	0.12	-0.3
3,406,658	-		BT2749	0.12	-0.7
3,406,658	-		BT2749	0.12	-2.4
3,406,711	+		BT2749	0.15	-0.3
3,406,716	+		BT2749	0.15	-4.1
3,406,733	+		BT2749	0.16	+1.6
3,406,750	+		BT2749	0.16	-3.0
3,406,759	+		BT2749	0.17	-2.2
3,406,818	-		BT2749	0.20	-1.8
3,406,896	+		BT2749	0.24	-2.4
3,406,897	-		BT2749	0.24	-0.5
3,406,898	+		BT2749	0.24	+0.9
3,406,898	+		BT2749	0.24	-1.5
3,406,898	+		BT2749	0.24	-3.1
3,406,899	-		BT2749	0.24	-2.5
3,406,900	+		BT2749	0.24	-1.7
3,406,900	+		BT2749	0.24	-2.6
3,406,901	-		BT2749	0.24	-0.5
3,406,901	-		BT2749	0.24	-2.8
3,406,901	-		BT2749	0.24	-2.4
3,406,918	+		BT2749	0.25	+1.7
3,406,924	+		BT2749	0.25	-2.8
3,406,983	-		BT2749	0.28	-1.8
3,407,079	-		BT2749	0.32	-0.9
3,407,103	-		BT2749	0.34	-2.7
3,407,135	-		BT2749	0.35	-2.7
3,407,250	+		BT2749	0.41	-2.3
3,407,257	+		BT2749	0.41	-3.9
3,407,281	+		BT2749	0.42	-1.7
3,407,284	+		BT2749	0.42	-3.3
3,407,284	+		BT2749	0.42	-2.9
3,407,333	-		BT2749	0.45	-0.3
3,407,340	-		BT2749	0.45	-3.7
3,407,340	-		BT2749	0.45	-2.3
3,407,365	-		BT2749	0.46	-3.1
3,407,368	-		BT2749	0.46	-0.7
3,407,373	+		BT2749	0.47	-3.3
3,407,379	-		BT2749	0.47	+0.5
3,407,380	+		BT2749	0.47	-4.5
3,407,382	+		BT2749	0.47	+1.3
3,407,461	-		BT2749	0.51	-2.4
3,407,468	+		BT2749	0.51	-1.4
3,407,469	-		BT2749	0.51	-1.1
3,407,478	+		BT2749	0.52	-3.4
3,407,479	-		BT2749	0.52	-0.1
3,407,591	+		BT2749	0.57	-0.6
3,407,591	+		BT2749	0.57	-0.1
3,407,600	+		BT2749	0.58	-3.2
3,407,620	+		BT2749	0.58	+1.3
3,407,620	+		BT2749	0.58	-0.6
3,407,636	+		BT2749	0.59	-2.3
3,407,670	+		BT2749	0.61	-0.7
3,407,689	+		BT2749	0.62	-2.1
3,407,689	+		BT2749	0.62	-3.3
3,407,692	-		BT2749	0.62	-3.1
3,407,696	-		BT2749	0.62	-4.3
3,407,731	+		BT2749	0.64	-0.4
3,407,776	-		BT2749	0.66	-1.9
3,407,942	-		BT2749	0.74	-4.4
3,408,071	+		BT2749	0.80	-2.8
3,408,090	+		BT2749	0.81	-1.4
3,408,091	-		BT2749	0.81	-2.4
3,408,091	-		BT2749	0.81	-4.1
3,408,091	-		BT2749	0.81	-3.0
3,408,117	+		BT2749	0.82	-1.3
3,408,118	-		BT2749	0.82	-1.3
3,408,118	-		BT2749	0.82	-3.2
3,408,160	-		BT2749	0.85	-0.7
3,408,302	-				-2.6
3,408,303	+				-3.9
3,408,365	-				-3.6
3,408,443	-				-0.1
3,408,471	-				-1.3
3,408,478	+				-0.4
3,408,479	-				-0.3
3,408,519	+		BT2750	0.14	-0.1
3,408,519	+		BT2750	0.14	+1.5
3,408,544	-		BT2750	0.19	+1.1
3,408,585	+		BT2750	0.28	+0.2
3,408,586	-		BT2750	0.28	-0.8
3,408,623	-		BT2750	0.36	+0.4
3,408,650	+		BT2750	0.41	-0.1
3,408,651	-		BT2750	0.42	-1.1
3,408,651	-		BT2750	0.42	+0.3
3,408,656	-		BT2750	0.43	-0.1
3,408,656	-		BT2750	0.43	-0.5
3,408,736	-		BT2750	0.60	-1.0
3,408,793	-		BT2750	0.72	-1.8
3,408,793	-		BT2750	0.72	-1.3
3,408,884	-				-0.2
3,408,964	-				-0.8
3,408,983	+				+0.2
3,408,984	-				-0.1
3,408,984	-				-0.4
3,409,001	+				-1.0
3,409,020	-				-2.2
3,409,030	+				-0.8
3,409,142	-				-0.7
3,409,174	+		BT2751	0.11	+1.3
3,409,197	+		BT2751	0.13	-1.1
3,409,197	+		BT2751	0.13	-0.3
3,409,198	-		BT2751	0.13	-1.3
3,409,198	-		BT2751	0.13	-1.0
3,409,202	-		BT2751	0.13	-0.3
3,409,258	+		BT2751	0.16	-0.3
3,409,258	+		BT2751	0.16	+0.6
3,409,263	+		BT2751	0.16	+0.6
3,409,263	+		BT2751	0.16	-0.3
3,409,263	+		BT2751	0.16	-0.4
3,409,263	+		BT2751	0.16	-0.5
3,409,263	+		BT2751	0.16	-2.9
3,409,264	-		BT2751	0.16	-1.9
3,409,264	-		BT2751	0.16	-2.4
3,409,352	-		BT2751	0.21	+1.3
3,409,380	+		BT2751	0.23	-0.3
3,409,380	+				+1.3
3,409,384	-		BT2751	0.23	-2.1
3,409,391	-		BT2751	0.24	-2.4
3,409,391	-		BT2751	0.24	+0.9
3,409,458	+		BT2751	0.27	-1.5
3,409,464	+		BT2751	0.28	+0.3