Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2666

Experiment: BHIS with Vancomycin 0.016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Vancomycin 0.016 mg/ml
3,321,218	+		BT2664	0.85	-0.9
3,321,219	-		BT2664	0.85	-0.8
3,321,265	+				-0.8
3,321,266	-				+0.9
3,321,330	+				+2.2
3,321,359	+				+0.3
3,321,359	+				+0.0
3,321,360	-				+0.8
3,321,369	+				-2.3
3,321,442	-		BT2665	0.10	+2.5
3,321,442	-		BT2665	0.10	+4.3
3,321,442	-		BT2665	0.10	+2.3
3,321,468	+		BT2665	0.14	+3.2
3,321,472	+		BT2665	0.14	-0.4
3,321,473	-		BT2665	0.14	+2.1
3,321,497	-		BT2665	0.17	+0.5
3,321,497	-		BT2665	0.17	+0.7
3,321,513	+		BT2665	0.19	+0.6
3,321,513	+		BT2665	0.19	-0.6
3,321,516	+		BT2665	0.19	+0.2
3,321,529	+		BT2665	0.21	-1.3
3,321,587	+		BT2665	0.28	-0.8
3,321,608	+		BT2665	0.31	+0.6
3,321,660	+		BT2665	0.37	+0.5
3,321,661	-		BT2665	0.37	+1.5
3,321,742	-		BT2665	0.47	+2.8
3,321,777	+		BT2665	0.52	-2.2
3,321,858	+		BT2665	0.62	-1.1
3,321,971	-		BT2665	0.75	+3.6
3,322,009	-		BT2665	0.80	+1.3
3,322,059	+		BT2665	0.86	+0.2
3,322,062	+		BT2665	0.87	+1.2
3,322,062	+		BT2665	0.87	-0.7
3,322,062	+		BT2665	0.87	-1.8
3,322,063	-		BT2665	0.87	+1.7
3,322,092	+				-1.2
3,322,193	+				-0.1
3,322,193	+				-0.6
3,322,194	-				+2.9
3,322,288	+		BT2666	0.14	+1.7
3,322,292	+		BT2666	0.15	+0.9
3,322,293	-		BT2666	0.15	+2.5
3,322,296	+		BT2666	0.15	+0.1
3,322,297	-		BT2666	0.15	+0.2
3,322,298	+		BT2666	0.15	+0.6
3,322,298	+		BT2666	0.15	+0.7
3,322,301	+		BT2666	0.16	+0.2
3,322,301	+		BT2666	0.16	-0.8
3,322,301	+		BT2666	0.16	+0.0
3,322,301	+		BT2666	0.16	+0.0
3,322,302	-		BT2666	0.16	+4.0
3,322,305	+		BT2666	0.17	-1.0
3,322,506	+		BT2666	0.47	-1.9
3,322,535	+		BT2666	0.52	+1.2
3,322,535	+		BT2666	0.52	+2.4
3,322,555	+		BT2666	0.55	-0.1
3,322,555	+		BT2666	0.55	-2.8
3,322,564	+		BT2666	0.56	+0.3
3,322,564	+		BT2666	0.56	-0.8
3,322,569	-		BT2666	0.57	+2.4
3,322,582	+		BT2666	0.59	+0.2
3,322,583	-		BT2666	0.59	+5.7
3,322,585	+		BT2666	0.59	-0.1
3,322,588	+		BT2666	0.60	-0.3
3,322,588	+		BT2666	0.60	-0.6
3,322,589	-		BT2666	0.60	+3.5
3,322,614	+		BT2666	0.64	+0.3
3,322,615	-		BT2666	0.64	+2.4
3,322,664	+		BT2666	0.71	-1.8
3,322,722	-		BT2666	0.80	+3.8
3,322,739	+		BT2666	0.83	-0.5
3,322,757	+		BT2666	0.86	-1.4
3,322,941	+		BT2667	0.12	+0.0
3,322,950	+		BT2667	0.14	-0.2
3,322,982	+		BT2667	0.19	-0.1
3,322,982	+		BT2667	0.19	-0.8
3,322,982	+		BT2667	0.19	+2.0
3,322,983	-		BT2667	0.19	+4.3
3,323,021	+		BT2667	0.26	-0.9
3,323,051	+		BT2667	0.31	+0.2
3,323,054	+		BT2667	0.31	+0.3
3,323,201	-		BT2667	0.55	+1.8
3,323,262	+		BT2667	0.65	+0.8
3,323,295	+		BT2667	0.71	+0.2
3,323,409	+		BT2667	0.90	-1.1
3,323,409	+		BT2667	0.90	+0.0
3,323,410	-		BT2667	0.90	+2.3
3,323,429	+				+0.1
3,323,429	+				-1.3
3,323,429	+				-1.4
3,323,433	+				-0.2
3,323,434	-				+3.1
3,323,475	+				-1.0
3,323,475	+				+0.2
3,323,502	+				+2.8
3,323,657	-		BT2668	0.20	+0.1
3,323,755	+		BT2668	0.32	-0.1
3,323,756	-		BT2668	0.32	+1.2
3,323,759	+		BT2668	0.32	-0.3
3,323,765	-		BT2668	0.33	+0.2
3,323,765	-		BT2668	0.33	+1.2
3,323,767	+		BT2668	0.33	-0.1
3,323,768	-		BT2668	0.33	-1.8
3,323,803	+		BT2668	0.38	+0.5