Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2664

Experiment: BHIS with Vancomycin 0.016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Vancomycin 0.016 mg/ml
3,319,442	-		BT2663	0.36	+3.0
3,319,482	+		BT2663	0.38	+1.2
3,319,504	-		BT2663	0.40	+3.2
3,319,509	+		BT2663	0.40	-1.0
3,319,523	-		BT2663	0.41	+3.7
3,319,576	+		BT2663	0.45	-2.1
3,319,577	-		BT2663	0.45	+3.6
3,319,581	-		BT2663	0.45	+2.9
3,319,581	-		BT2663	0.45	+3.9
3,319,582	+		BT2663	0.45	-0.4
3,319,582	+		BT2663	0.45	-1.1
3,319,582	+		BT2663	0.45	+0.0
3,319,591	+		BT2663	0.46	+1.0
3,319,642	-		BT2663	0.49	+2.9
3,319,672	+		BT2663	0.52	+0.3
3,319,673	-		BT2663	0.52	+3.3
3,319,673	-		BT2663	0.52	+3.9
3,319,676	+		BT2663	0.52	-0.5
3,319,676	+		BT2663	0.52	+1.8
3,319,677	-		BT2663	0.52	+2.7
3,319,678	+		BT2663	0.52	+0.3
3,319,678	+		BT2663	0.52	-0.0
3,319,679	-		BT2663	0.52	+2.2
3,319,837	+		BT2663	0.63	+1.4
3,319,896	-		BT2663	0.67	+2.4
3,319,899	+		BT2663	0.67	-1.3
3,319,900	-		BT2663	0.67	+1.2
3,319,976	-		BT2663	0.72	+2.3
3,319,987	+		BT2663	0.73	-0.3
3,319,997	-		BT2663	0.74	+3.3
3,319,997	-		BT2663	0.74	+2.0
3,320,027	+		BT2663	0.76	+1.2
3,320,143	+		BT2663	0.84	+0.2
3,320,143	+		BT2663	0.84	-1.2
3,320,144	-		BT2663	0.84	+3.5
3,320,181	+		BT2663	0.87	-2.6
3,320,232	+				-0.6
3,320,336	-				+2.0
3,320,393	+				+2.0
3,320,413	+				+0.2
3,320,435	+				+0.2
3,320,475	+				+1.2
3,320,505	-				+3.4
3,320,557	+		BT2664	0.15	-0.3
3,320,579	-		BT2664	0.18	+3.4
3,320,591	-		BT2664	0.19	+2.4
3,320,597	-		BT2664	0.20	+2.8
3,320,612	+		BT2664	0.21	+0.3
3,320,612	+		BT2664	0.21	-1.3
3,320,615	-		BT2664	0.21	+2.7
3,320,634	+		BT2664	0.23	-2.1
3,320,635	-		BT2664	0.24	+2.6
3,320,659	-		BT2664	0.26	+2.0
3,320,759	-		BT2664	0.37	+0.4
3,320,847	+		BT2664	0.46	-0.2
3,320,864	+		BT2664	0.48	+0.1
3,320,885	+		BT2664	0.50	-0.8
3,320,885	+		BT2664	0.50	+0.0
3,320,911	-		BT2664	0.53	+1.4
3,321,000	+		BT2664	0.62	-1.1
3,321,017	+		BT2664	0.64	+0.6
3,321,127	-		BT2664	0.76	+0.8
3,321,131	+		BT2664	0.76	+0.7
3,321,218	+		BT2664	0.85	-0.9
3,321,219	-		BT2664	0.85	-0.8
3,321,265	+				-0.8
3,321,266	-				+0.9
3,321,330	+				+2.2
3,321,359	+				+0.3
3,321,359	+				+0.0
3,321,360	-				+0.8
3,321,369	+				-2.3
3,321,442	-		BT2665	0.10	+2.5
3,321,442	-		BT2665	0.10	+4.3
3,321,442	-		BT2665	0.10	+2.3
3,321,468	+		BT2665	0.14	+3.2
3,321,472	+		BT2665	0.14	-0.4
3,321,473	-		BT2665	0.14	+2.1
3,321,497	-		BT2665	0.17	+0.5
3,321,497	-		BT2665	0.17	+0.7
3,321,513	+		BT2665	0.19	+0.6
3,321,513	+		BT2665	0.19	-0.6
3,321,516	+		BT2665	0.19	+0.2
3,321,529	+		BT2665	0.21	-1.3
3,321,587	+		BT2665	0.28	-0.8
3,321,608	+		BT2665	0.31	+0.6
3,321,660	+		BT2665	0.37	+0.5
3,321,661	-		BT2665	0.37	+1.5
3,321,742	-		BT2665	0.47	+2.8
3,321,777	+		BT2665	0.52	-2.2
3,321,858	+		BT2665	0.62	-1.1
3,321,971	-		BT2665	0.75	+3.6
3,322,009	-		BT2665	0.80	+1.3
3,322,059	+		BT2665	0.86	+0.2
3,322,062	+		BT2665	0.87	+1.2
3,322,062	+		BT2665	0.87	-0.7
3,322,062	+		BT2665	0.87	-1.8
3,322,063	-		BT2665	0.87	+1.7
3,322,092	+				-1.2
3,322,193	+				-0.1
3,322,193	+				-0.6
3,322,194	-				+2.9
3,322,288	+		BT2666	0.14	+1.7
3,322,292	+		BT2666	0.15	+0.9
3,322,293	-		BT2666	0.15	+2.5
3,322,296	+		BT2666	0.15	+0.1
3,322,297	-		BT2666	0.15	+0.2
3,322,298	+		BT2666	0.15	+0.6
3,322,298	+		BT2666	0.15	+0.7
3,322,301	+		BT2666	0.16	+0.2
3,322,301	+		BT2666	0.16	-0.8
3,322,301	+		BT2666	0.16	+0.0
3,322,301	+		BT2666	0.16	+0.0
3,322,302	-		BT2666	0.16	+4.0
3,322,305	+		BT2666	0.17	-1.0