Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around p5482_37

Experiment: BHIS with Vancomycin 0.016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Vancomycin 0.016 mg/ml
30,029	+		p5482_35	0.75	+0.0
30,066	+		p5482_35	0.77	+0.8
30,066	+		p5482_35	0.77	-2.0
30,071	+		p5482_35	0.77	-1.0
30,084	+		p5482_35	0.78	+4.4
30,084	+		p5482_35	0.78	-1.5
30,084	+		p5482_35	0.78	+0.8
30,084	+		p5482_35	0.78	-0.2
30,084	+		p5482_35	0.78	-3.8
30,085	-		p5482_35	0.78	+0.2
30,085	-		p5482_35	0.78	-0.2
30,085	-		p5482_35	0.78	+1.2
30,085	-		p5482_35	0.78	-0.5
30,086	+		p5482_35	0.78	+1.8
30,087	-		p5482_35	0.79	-0.2
30,087	-		p5482_35	0.79	-0.8
30,087	-		p5482_35	0.79	+0.2
30,089	-		p5482_35	0.79	-2.3
30,089	-		p5482_35	0.79	+0.0
30,089	-		p5482_35	0.79	-0.7
30,104	+		p5482_35	0.80	-0.2
30,104	+		p5482_35	0.80	-2.6
30,105	-		p5482_35	0.80	-1.0
30,105	-		p5482_35	0.80	-1.1
30,105	-		p5482_35	0.80	+0.0
30,105	-		p5482_35	0.80	-1.2
30,105	-		p5482_35	0.80	-1.4
30,138	-		p5482_35	0.82	+0.7
30,138	-		p5482_35	0.82	-1.3
30,216	+		p5482_35	0.87	+1.4
30,216	+		p5482_35	0.87	+1.8
30,216	+		p5482_35	0.87	-1.6
30,216	+		p5482_35	0.87	-0.6
30,217	-		p5482_35	0.87	+0.7
30,217	-		p5482_35	0.87	+0.7
30,217	-		p5482_35	0.87	-1.2
30,217	-		p5482_35	0.87	+0.0
30,218	+		p5482_35	0.87	+0.5
30,218	+		p5482_35	0.87	-1.7
30,219	-		p5482_35	0.87	-3.1
30,219	-		p5482_35	0.87	+0.4
30,219	-		p5482_35	0.87	+0.5
30,219	-		p5482_35	0.87	-0.2
30,228	+		p5482_35	0.88	-1.4
30,228	+		p5482_35	0.88	-1.3
30,228	+		p5482_35	0.88	-0.7
30,229	-		p5482_35	0.88	-1.3
30,229	-		p5482_35	0.88	-1.0
30,229	-		p5482_35	0.88	-0.8
30,229	-		p5482_35	0.88	+2.6
30,230	+		p5482_35	0.88	+0.2
30,231	-		p5482_35	0.88	+1.8
30,231	-		p5482_35	0.88	+0.2
30,231	-		p5482_35	0.88	+1.2
30,231	-		p5482_35	0.88	+1.8
30,291	+				+0.7
30,292	-				+1.8
30,292	-				-2.5
30,292	-				+1.8
30,293	+				-1.5
30,320	+				-0.8
30,321	-				-0.5
30,332	+				-1.4
30,332	+				+0.3
30,332	+				+1.5
30,333	-				-0.1
30,333	-				+0.3
30,333	-				-0.8
30,333	-				+0.3
30,380	+				-1.1
30,389	-				-0.9
30,414	+				-1.8
30,415	-				-0.2
30,415	-				-0.5
30,418	+				-1.4
30,418	+				+0.6
30,419	-				-1.4
30,420	+				+1.8
30,420	+				-1.0
30,421	-				-0.5
30,423	+				+1.8
30,432	+				+0.1
30,433	-				-1.2
30,450	+				+0.4
30,524	+		p5482_36	0.23	+0.8
30,524	+		p5482_36	0.23	-0.4
30,525	-		p5482_36	0.23	-0.4
30,525	-		p5482_36	0.23	+0.6
30,526	+		p5482_36	0.23	-1.8
30,532	+		p5482_36	0.25	+2.2
30,532	+		p5482_36	0.25	+0.1
30,533	-		p5482_36	0.25	-0.2
30,533	-		p5482_36	0.25	+1.0
30,562	+		p5482_36	0.32	-0.6
30,562	+		p5482_36	0.32	+0.4
30,563	-		p5482_36	0.33	-0.6
30,589	-		p5482_36	0.39	+1.8
30,607	-		p5482_36	0.44	-0.1
30,663	-		p5482_36	0.58	-0.0
30,672	+		p5482_36	0.60	-1.0
30,673	-		p5482_36	0.60	-2.9
30,673	-		p5482_36	0.60	+1.8
30,687	+		p5482_36	0.64	-2.6
30,687	+		p5482_36	0.64	+1.8
30,753	+		p5482_36	0.80	-0.4
30,754	-		p5482_36	0.80	+1.1
30,754	-		p5482_36	0.80	+0.1
30,790	-		p5482_36	0.89	+0.4
30,817	+				-2.3
30,817	+				-1.2
30,817	+				-0.6
30,817	+				-0.3
30,818	-				-1.9
30,818	-				-0.2
30,818	-				+1.1
30,827	+				-0.9
30,827	+				-0.6
30,828	-				-1.1
30,828	-				+0.9
30,828	-				+0.4
30,840	+				-0.5
30,840	+				-0.5
30,840	+				-0.8
30,841	-				+0.2
30,841	-				-0.7
30,841	-				+0.9
30,842	+				-0.6
30,842	+				-0.2
30,842	+				-2.1
30,843	-				+0.1
30,843	-				+1.0
30,843	-				-0.4
30,843	-				-1.5
30,844	+				+0.1
30,845	-				+0.1
30,845	-				+0.4
30,893	-				-0.6
30,904	-				-0.3
30,905	+				-0.8
30,905	+				+0.4
30,905	+				+0.1
30,906	-				+0.1
30,911	+				-0.5
30,912	+				+0.6
30,912	+				-0.1
30,912	+				-1.0
30,912	+				+0.2
30,912	+				-0.8
30,912	+				+1.8
30,913	-				-3.3
30,913	-				+0.6
30,913	-				+0.1
30,913	-				+1.1
30,913	-				-0.5
30,913	-				+0.2
30,913	-				+0.0
30,914	+				-3.0
30,914	+				-3.4
30,914	+				+0.0
30,914	+				-2.1
30,915	-				-0.7
30,915	-				+0.2
30,925	+				-0.8
30,925	+				-1.5
30,926	-				-2.1
30,926	-				-1.2
30,926	-				-0.8
30,967	+				-0.3
30,968	-				+0.6
31,014	-				+0.2
31,018	+				+1.8
31,022	-				-0.1
31,024	+				-2.1
31,024	+				-0.8
31,025	-				+0.1
31,134	+		p5482_37	0.32	-0.8
31,134	+		p5482_37	0.32	-3.0
31,135	-		p5482_37	0.32	+1.8
31,135	-		p5482_37	0.32	-1.4
31,153	-		p5482_37	0.37	+0.1
31,158	-		p5482_37	0.38	+1.8
31,158	-		p5482_37	0.38	-1.4
31,158	-		p5482_37	0.38	-0.8
31,163	-		p5482_37	0.39	+1.1
31,300	+		p5482_37	0.75	-2.6
31,301	-		p5482_37	0.75	+0.8
31,437	-				-1.2
31,462	+				-0.3
31,492	-				+0.8
31,492	-				+1.0
31,516	+				-0.9
31,517	-				+1.5
31,573	-				-2.5
31,642	-				+0.7
31,642	-				-0.2
31,762	+				-2.7
31,774	-				+0.7
31,774	-				+0.4
31,784	+				-0.7
31,785	-				+0.0
31,785	-				+1.8
31,785	-				+0.1
31,785	-				+1.0
31,796	+				-0.9
31,796	+				-1.5
31,796	+				-0.6
31,845	+				-2.7
31,845	+				-0.2
31,846	-				+0.4
31,849	+				-3.8
31,850	-				+2.8
31,921	-				+1.5
31,964	-		p5482_38	0.11	+0.2
32,004	-		p5482_38	0.15	+0.8
32,004	-		p5482_38	0.15	-1.4
32,026	-		p5482_38	0.17	+0.4
32,068	-		p5482_38	0.21	-1.5
32,068	-		p5482_38	0.21	-0.9
32,068	-		p5482_38	0.21	-0.5
32,072	-		p5482_38	0.22	-0.3
32,072	-		p5482_38	0.22	-1.0
32,142	-		p5482_38	0.29	+0.8
32,142	-		p5482_38	0.29	+1.8
32,154	-		p5482_38	0.30	-0.4
32,160	-		p5482_38	0.30	-0.5
32,199	-		p5482_38	0.34	+0.2
32,199	-		p5482_38	0.34	-0.4
32,209	-		p5482_38	0.35	+0.4
32,240	-		p5482_38	0.38	+0.7
32,240	-		p5482_38	0.38	+1.1
32,240	-		p5482_38	0.38	+0.4
32,242	-		p5482_38	0.39	+1.8
32,242	-		p5482_38	0.39	-2.0
32,242	-		p5482_38	0.39	+0.6
32,250	-		p5482_38	0.39	-0.7
32,250	-				+1.8
32,250	-		p5482_38	0.39	+0.3
32,252	-		p5482_38	0.40	+1.1
32,252	-		p5482_38	0.40	-0.8
32,256	-		p5482_38	0.40	-1.3
32,256	-		p5482_38	0.40	+0.2
32,259	-		p5482_38	0.40	-0.2
32,392	-		p5482_38	0.53	-1.2
32,392	-		p5482_38	0.53	-0.2
32,392	-		p5482_38	0.53	-1.9