Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVUA0012

Experiment: MoLS4 with L-Serine (N), without W

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoLS4 with L-Serine (N), without W
15,249	+	nifK	DVUA0011	0.32	-1.8
15,336	-	nifK	DVUA0011	0.39	+0.1
15,338	+	nifK	DVUA0011	0.39	-1.8
15,348	-	nifK	DVUA0011	0.39	-1.7
15,450	-	nifK	DVUA0011	0.47	-1.3
15,533	-	nifK	DVUA0011	0.53	-1.8
15,553	-	nifK	DVUA0011	0.54	-2.1
15,565	+	nifK	DVUA0011	0.55	-1.5
15,583	+	nifK	DVUA0011	0.56	-0.8
15,593	+	nifK	DVUA0011	0.57	+0.1
15,601	-	nifK	DVUA0011	0.58	-1.1
15,634	+	nifK	DVUA0011	0.60	-0.4
15,691	-	nifK	DVUA0011	0.64	-1.5
15,702	+	nifK	DVUA0011	0.65	-1.4
15,749	+	nifK	DVUA0011	0.68	-0.4
15,789	+	nifK	DVUA0011	0.71	-1.2
16,041	+	nifK	DVUA0011	0.89	-0.6
16,046	+	nifK	DVUA0011	0.90	+0.1
16,152	-				-0.9
16,163	+				-1.1
16,210	+				-0.7
16,216	-				-0.9
16,265	+				-0.7
16,281	-				-1.6
16,345	-				-1.4
16,354	-				-1.6
16,631	-	nifD	DVUA0012	0.25	-0.9
16,632	-	nifD	DVUA0012	0.25	-0.9
16,677	+	nifD	DVUA0012	0.28	-0.9
16,695	-	nifD	DVUA0012	0.29	-0.8
16,732	+	nifD	DVUA0012	0.31	-0.9
16,761	+	nifD	DVUA0012	0.33	-1.2
16,856	-	nifD	DVUA0012	0.39	-0.7
16,856	-	nifD	DVUA0012	0.39	-3.2
16,856	-	nifD	DVUA0012	0.39	+0.1
16,866	-	nifD	DVUA0012	0.39	-0.3
16,920	+	nifD	DVUA0012	0.43	-0.4
16,923	-	nifD	DVUA0012	0.43	-1.3
16,928	-	nifD	DVUA0012	0.43	-0.2
16,994	-	nifD	DVUA0012	0.47	-0.9
17,040	+	nifD	DVUA0012	0.50	+0.3
17,064	+	nifD	DVUA0012	0.52	-1.7
17,072	-	nifD	DVUA0012	0.52	-0.3
17,100	+	nifD	DVUA0012	0.54	-1.0
17,131	-	nifD	DVUA0012	0.56	-1.3
17,173	-	nifD	DVUA0012	0.58	-2.6
17,250	+	nifD	DVUA0012	0.63	-2.6
17,282	+	nifD	DVUA0012	0.65	-1.2
17,288	-	nifD	DVUA0012	0.65	-0.2
17,295	+	nifD	DVUA0012	0.66	-1.4
17,305	-	nifD	DVUA0012	0.66	-0.9
17,366	+	nifD	DVUA0012	0.70	-1.1
17,405	-	nifD	DVUA0012	0.73	-1.1
17,438	+	nifD	DVUA0012	0.75	-1.2
17,557	+	nifD	DVUA0012	0.82	-1.1
17,600	+	nifD	DVUA0012	0.85	-1.0
17,655	-	nifD	DVUA0012	0.88	-1.4
17,668	+	nifD	DVUA0012	0.89	-0.0
17,668	+	nifD	DVUA0012	0.89	-0.2
17,694	+				-0.7
17,701	-				-1.2
17,786	+				-0.7
17,831	-				-1.2
17,843	-				-1.6
17,919	-	glnB-2	DVUA0013	0.14	-0.1
17,997	+	glnB-2	DVUA0013	0.34	-1.1
18,002	+	glnB-2	DVUA0013	0.35	-0.1
18,061	-	glnB-2	DVUA0013	0.50	-0.3
18,085	-	glnB-2	DVUA0013	0.56	-1.5
18,186	+	glnB-2	DVUA0013	0.82	-0.8
18,242	-				-0.9
18,282	+				-0.5
18,296	+				-1.0
18,296	+				-0.7
18,296	+				-0.1
18,304	-	glnB-3	DVUA0014	0.11	-0.6
18,304	-	glnB-3	DVUA0014	0.11	+0.5
18,304	-	glnB-3	DVUA0014	0.11	+1.4
18,304	-	glnB-3	DVUA0014	0.11	-1.4
18,353	+	glnB-3	DVUA0014	0.26	-0.7
18,370	+	glnB-3	DVUA0014	0.31	-0.8
18,378	-	glnB-3	DVUA0014	0.34	+0.7
18,404	+	glnB-3	DVUA0014	0.42	-0.9
18,404	+	glnB-3	DVUA0014	0.42	-1.2
18,431	+	glnB-3	DVUA0014	0.50	-1.8
18,439	-	glnB-3	DVUA0014	0.52	-1.1
18,439	-	glnB-3	DVUA0014	0.52	+0.1
18,466	-	glnB-3	DVUA0014	0.61	-0.4
18,473	-	glnB-3	DVUA0014	0.63	+0.1
18,492	-	glnB-3	DVUA0014	0.69	-0.2
18,506	-	glnB-3	DVUA0014	0.73	-0.0
18,527	+	glnB-3	DVUA0014	0.79	+0.1
18,535	-	glnB-3	DVUA0014	0.82	-0.4
18,559	-	glnB-3	DVUA0014	0.89	-1.0
18,747	+				-0.8
18,755	-				+0.0
18,849	-				-0.7