Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU3161

Experiment: MoLS4 with L-Serine (N), without W

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoLS4 with L-Serine (N), without W
3,316,494	-	gpsA	DVU3159	0.33	-0.3
3,316,511	-	gpsA	DVU3159	0.34	+0.0
3,316,563	+	gpsA	DVU3159	0.40	+0.5
3,316,568	+	gpsA	DVU3159	0.40	-0.1
3,316,630	+	gpsA	DVU3159	0.46	+1.8
3,316,704	+	gpsA	DVU3159	0.54	-1.1
3,316,705	-	gpsA	DVU3159	0.54	-1.0
3,316,707	-	gpsA	DVU3159	0.54	-1.3
3,316,712	+	gpsA	DVU3159	0.55	-0.5
3,316,712	-	gpsA	DVU3159	0.55	+0.4
3,316,712	-	gpsA	DVU3159	0.55	-0.5
3,316,771	+	gpsA	DVU3159	0.61	+0.2
3,316,860	+	gpsA	DVU3159	0.69	-0.2
3,316,868	-	gpsA	DVU3159	0.70	-0.3
3,316,873	-	gpsA	DVU3159	0.71	-0.9
3,316,876	+	gpsA	DVU3159	0.71	-0.1
3,316,889	+	gpsA	DVU3159	0.72	+0.9
3,316,889	+	gpsA	DVU3159	0.72	-1.2
3,316,897	-	gpsA	DVU3159	0.73	-1.1
3,316,904	+	gpsA	DVU3159	0.74	+0.7
3,316,907	-	gpsA	DVU3159	0.74	-0.4
3,316,907	-	gpsA	DVU3159	0.74	-0.4
3,316,907	-	gpsA	DVU3159	0.74	+0.3
3,316,909	+	gpsA	DVU3159	0.74	+0.5
3,316,909	+	gpsA	DVU3159	0.74	-0.7
3,316,909	+	gpsA	DVU3159	0.74	-0.2
3,317,001	-	gpsA	DVU3159	0.84	-0.5
3,317,001	-	gpsA	DVU3159	0.84	-0.4
3,317,050	+	gpsA	DVU3159	0.89	-0.0
3,317,050	+	gpsA	DVU3159	0.89	-0.0
3,317,050	+	gpsA	DVU3159	0.89	-1.6
3,317,058	-	gpsA	DVU3159	0.89	-0.6
3,317,058	-	gpsA	DVU3159	0.89	-0.8
3,317,060	+	gpsA	DVU3159	0.90	-0.1
3,317,060	+	gpsA	DVU3159	0.90	-0.8
3,317,132	+				-0.0
3,317,142	+				-0.6
3,317,142	+				-0.0
3,317,150	-				-0.9
3,317,150	-				-0.4
3,317,155	-				-1.1
3,317,170	+				+0.3
3,317,176	-				-0.3
3,317,193	+				-0.8
3,317,226	-				+1.3
3,317,226	-				+0.1
3,317,228	+				+2.6
3,317,233	+				+0.4
3,317,234	+				+0.0
3,317,386	+				-0.8
3,317,410	+				-1.1
3,317,420	+				+0.2
3,317,458	+				+0.2
3,317,579	+		DVU3161	0.12	+0.2
3,317,671	-		DVU3161	0.21	-0.1
3,317,709	-		DVU3161	0.24	-0.6
3,317,713	+		DVU3161	0.25	-0.5
3,317,743	+		DVU3161	0.28	-0.5
3,317,998	+		DVU3161	0.52	+0.0
3,318,002	+		DVU3161	0.52	-0.4
3,318,003	+		DVU3161	0.52	-0.1
3,318,006	-		DVU3161	0.53	+2.6
3,318,017	-		DVU3161	0.54	-0.2
3,318,033	-		DVU3161	0.55	+0.7
3,318,033	-		DVU3161	0.55	-0.8
3,318,037	-		DVU3161	0.56	-1.2
3,318,038	-		DVU3161	0.56	+0.2
3,318,090	+		DVU3161	0.61	+1.6
3,318,090	+		DVU3161	0.61	+0.1
3,318,097	+		DVU3161	0.61	+0.1
3,318,121	-		DVU3161	0.64	-0.4
3,318,272	-		DVU3161	0.78	-0.0
3,318,292	-		DVU3161	0.80	-0.4
3,318,317	+		DVU3161	0.82	-0.1
3,318,335	-		DVU3161	0.84	+1.1
3,318,390	+		DVU3161	0.89	-1.3
3,318,398	-		DVU3161	0.90	-0.0
3,318,442	+				+0.1
3,318,521	-				+1.4
3,318,536	-				-0.9
3,318,553	-				-0.4
3,318,625	+				+0.2
3,318,635	+				-0.2
3,318,668	+				+0.2
3,318,757	+		DVU3162	0.12	+0.3
3,318,796	-		DVU3162	0.15	+1.0
3,318,808	+		DVU3162	0.16	-0.1
3,318,811	-		DVU3162	0.16	+0.1
3,318,816	-		DVU3162	0.16	-1.3
3,318,854	+		DVU3162	0.19	+0.1
3,318,872	-		DVU3162	0.21	-0.1
3,318,895	-		DVU3162	0.22	+0.1
3,318,907	-		DVU3162	0.23	-0.1
3,318,919	-		DVU3162	0.24	-0.2
3,318,933	+		DVU3162	0.25	+0.2
3,318,933	+		DVU3162	0.25	+0.3
3,319,079	+		DVU3162	0.36	-0.2
3,319,085	-		DVU3162	0.37	-1.2
3,319,110	+		DVU3162	0.39	-0.8
3,319,118	-		DVU3162	0.40	-0.1
3,319,123	+		DVU3162	0.40	-0.1
3,319,150	-		DVU3162	0.42	-1.5
3,319,230	+		DVU3162	0.48	+0.1
3,319,245	+		DVU3162	0.49	-1.0
3,319,253	-		DVU3162	0.50	+0.2
3,319,255	+		DVU3162	0.50	+0.4
3,319,260	+		DVU3162	0.50	+0.3
3,319,299	-		DVU3162	0.53	+1.1
3,319,301	+		DVU3162	0.54	+0.4
3,319,477	+		DVU3162	0.67	+0.9