Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU3026
Experiment: MoLS4 with L-Serine (N), without W
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoLS4 with L-Serine (N), without W |
---|---|---|---|---|---|
remove | |||||
3,147,460 | - | +0.2 | |||
3,147,499 | + | +0.0 | |||
3,147,514 | + | +0.9 | |||
3,147,621 | + | -1.5 | |||
3,148,000 | + | DVU3026 | 0.28 | -0.0 | |
3,148,272 | + | DVU3026 | 0.44 | +0.1 | |
3,148,306 | + | DVU3026 | 0.46 | +0.5 | |
3,148,387 | - | DVU3026 | 0.51 | +1.4 | |
3,148,485 | + | DVU3026 | 0.56 | +0.5 | |
3,148,657 | + | DVU3026 | 0.66 | -0.5 | |
3,148,746 | + | DVU3026 | 0.72 | -1.6 | |
3,148,770 | + | DVU3026 | 0.73 | -1.2 | |
3,148,772 | + | DVU3026 | 0.73 | -0.0 | |
3,148,778 | - | DVU3026 | 0.73 | -0.1 | |
3,148,833 | - | DVU3026 | 0.77 | +0.5 | |
3,148,938 | + | DVU3026 | 0.83 | +0.4 | |
3,148,974 | - | DVU3026 | 0.85 | -0.2 | |
3,149,136 | + | +0.2 | |||
3,149,147 | + | -0.4 | |||
3,149,155 | - | -1.1 | |||
3,149,179 | - | -0.3 | |||
3,149,226 | + | +0.3 | |||
3,149,255 | - | +0.1 | |||
3,149,533 | + | -0.1 | |||
3,149,601 | + | glcD | DVU3027 | 0.14 | +0.2 |
3,149,809 | + | glcD | DVU3027 | 0.29 | +0.1 |
3,150,028 | + | glcD | DVU3027 | 0.45 | -1.2 |
3,150,047 | - | glcD | DVU3027 | 0.46 | +0.3 |
Or see this region's nucleotide sequence