Experiment: MoLS4 with L-Serine (N), without W
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2413 and DVU2414 are separated by 194 nucleotides DVU2414 and DVU2415 are separated by 352 nucleotides
DVU2413: DVU2413 - radical SAM domain protein (TIGR), at 2,518,594 to 2,520,636
DVU2413
DVU2414: DVU2414 - hypothetical protein (TIGR), at 2,520,831 to 2,522,591
DVU2414
DVU2415: DVU2415 - hypothetical protein (TIGR), at 2,522,944 to 2,524,371
DVU2415
Position (kb)
2520
2521
2522
2523 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2519.855 kb on + strand, within DVU2413 at 2519.961 kb on + strand, within DVU2413 at 2519.961 kb on + strand, within DVU2413 at 2519.969 kb on - strand, within DVU2413 at 2519.969 kb on - strand, within DVU2413 at 2519.969 kb on - strand, within DVU2413 at 2519.977 kb on + strand, within DVU2413 at 2520.058 kb on + strand, within DVU2413 at 2520.154 kb on - strand, within DVU2413 at 2520.166 kb on - strand, within DVU2413 at 2520.166 kb on - strand, within DVU2413 at 2520.166 kb on - strand, within DVU2413 at 2520.179 kb on - strand, within DVU2413 at 2520.179 kb on - strand, within DVU2413 at 2520.203 kb on + strand, within DVU2413 at 2520.222 kb on + strand, within DVU2413 at 2520.258 kb on + strand, within DVU2413 at 2520.384 kb on + strand, within DVU2413 at 2520.392 kb on - strand, within DVU2413 at 2520.392 kb on - strand, within DVU2413 at 2520.392 kb on - strand, within DVU2413 at 2520.518 kb on - strand at 2520.661 kb on + strand at 2520.705 kb on + strand at 2520.705 kb on + strand at 2520.713 kb on - strand at 2520.972 kb on - strand at 2520.988 kb on - strand at 2521.004 kb on + strand at 2521.163 kb on - strand, within DVU2414 at 2521.271 kb on - strand, within DVU2414 at 2521.282 kb on + strand, within DVU2414 at 2521.287 kb on + strand, within DVU2414 at 2521.290 kb on - strand, within DVU2414 at 2521.340 kb on - strand, within DVU2414 at 2521.361 kb on - strand, within DVU2414 at 2521.500 kb on + strand, within DVU2414 at 2521.518 kb on + strand, within DVU2414 at 2521.528 kb on + strand, within DVU2414 at 2521.536 kb on - strand, within DVU2414 at 2521.553 kb on + strand, within DVU2414 at 2521.624 kb on + strand, within DVU2414 at 2521.632 kb on - strand, within DVU2414 at 2521.642 kb on - strand, within DVU2414 at 2521.655 kb on - strand, within DVU2414 at 2521.662 kb on + strand, within DVU2414 at 2521.665 kb on + strand, within DVU2414 at 2521.798 kb on + strand, within DVU2414 at 2521.801 kb on - strand, within DVU2414 at 2521.806 kb on - strand, within DVU2414 at 2521.839 kb on - strand, within DVU2414 at 2521.854 kb on + strand, within DVU2414 at 2521.933 kb on + strand, within DVU2414 at 2521.933 kb on + strand, within DVU2414 at 2521.941 kb on - strand, within DVU2414 at 2521.941 kb on - strand, within DVU2414 at 2522.023 kb on + strand, within DVU2414 at 2522.137 kb on + strand, within DVU2414 at 2522.295 kb on - strand, within DVU2414 at 2522.320 kb on + strand, within DVU2414 at 2522.328 kb on - strand, within DVU2414 at 2522.605 kb on - strand at 2522.605 kb on - strand at 2522.608 kb on + strand at 2522.624 kb on - strand at 2522.626 kb on + strand at 2522.626 kb on + strand at 2522.626 kb on + strand at 2522.634 kb on - strand at 2522.634 kb on - strand at 2522.634 kb on - strand at 2522.717 kb on + strand at 2522.779 kb on - strand at 2522.826 kb on + strand at 2522.907 kb on + strand at 2522.921 kb on + strand at 2522.929 kb on + strand at 2522.951 kb on + strand at 2522.990 kb on + strand at 2523.047 kb on - strand at 2523.048 kb on + strand at 2523.082 kb on + strand at 2523.173 kb on - strand, within DVU2415 at 2523.384 kb on + strand, within DVU2415 at 2523.414 kb on + strand, within DVU2415 at 2523.455 kb on - strand, within DVU2415 at 2523.483 kb on + strand, within DVU2415 at 2523.505 kb on + strand, within DVU2415 at 2523.517 kb on + strand, within DVU2415
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Serine (N), without W remove 2,519,855 + DVU2413 0.62 -0.2 2,519,961 + DVU2413 0.67 +0.2 2,519,961 + DVU2413 0.67 -0.6 2,519,969 - DVU2413 0.67 -0.4 2,519,969 - DVU2413 0.67 +1.0 2,519,969 - DVU2413 0.67 -1.3 2,519,977 + DVU2413 0.68 -0.5 2,520,058 + DVU2413 0.72 -2.8 2,520,154 - DVU2413 0.76 +0.1 2,520,166 - DVU2413 0.77 -0.8 2,520,166 - DVU2413 0.77 +0.6 2,520,166 - DVU2413 0.77 +0.6 2,520,179 - DVU2413 0.78 +0.3 2,520,179 - DVU2413 0.78 -0.0 2,520,203 + DVU2413 0.79 -0.2 2,520,222 + DVU2413 0.80 -0.2 2,520,258 + DVU2413 0.81 -0.2 2,520,384 + DVU2413 0.88 -0.2 2,520,392 - DVU2413 0.88 -0.2 2,520,392 - DVU2413 0.88 -1.0 2,520,392 - DVU2413 0.88 +0.3 2,520,518 - +1.0 2,520,661 + -0.2 2,520,705 + +0.3 2,520,705 + -0.4 2,520,713 - -0.5 2,520,972 - +0.0 2,520,988 - +0.9 2,521,004 + +0.1 2,521,163 - DVU2414 0.19 +0.1 2,521,271 - DVU2414 0.25 -0.3 2,521,282 + DVU2414 0.26 +2.4 2,521,287 + DVU2414 0.26 +0.3 2,521,290 - DVU2414 0.26 -0.0 2,521,340 - DVU2414 0.29 +1.0 2,521,361 - DVU2414 0.30 +0.3 2,521,500 + DVU2414 0.38 -0.7 2,521,518 + DVU2414 0.39 -0.5 2,521,528 + DVU2414 0.40 +2.2 2,521,536 - DVU2414 0.40 +1.2 2,521,553 + DVU2414 0.41 +0.5 2,521,624 + DVU2414 0.45 -0.1 2,521,632 - DVU2414 0.45 -0.6 2,521,642 - DVU2414 0.46 +0.1 2,521,655 - DVU2414 0.47 +0.2 2,521,662 + DVU2414 0.47 +1.2 2,521,665 + DVU2414 0.47 +1.1 2,521,798 + DVU2414 0.55 +0.0 2,521,801 - DVU2414 0.55 +0.1 2,521,806 - DVU2414 0.55 -0.1 2,521,839 - DVU2414 0.57 -0.3 2,521,854 + DVU2414 0.58 +0.3 2,521,933 + DVU2414 0.63 -0.2 2,521,933 + DVU2414 0.63 +1.1 2,521,941 - DVU2414 0.63 -0.2 2,521,941 - DVU2414 0.63 +0.7 2,522,023 + DVU2414 0.68 +0.0 2,522,137 + DVU2414 0.74 +0.4 2,522,295 - DVU2414 0.83 -0.0 2,522,320 + DVU2414 0.85 +0.7 2,522,328 - DVU2414 0.85 +0.3 2,522,605 - -0.3 2,522,605 - -0.9 2,522,608 + +0.0 2,522,624 - -0.4 2,522,626 + +0.0 2,522,626 + +0.3 2,522,626 + -0.1 2,522,634 - -0.3 2,522,634 - -0.3 2,522,634 - +0.2 2,522,717 + +0.0 2,522,779 - -1.5 2,522,826 + -0.3 2,522,907 + -0.5 2,522,921 + +0.1 2,522,929 + -1.0 2,522,951 + +0.2 2,522,990 + +0.2 2,523,047 - -1.0 2,523,048 + -0.1 2,523,082 + -0.3 2,523,173 - DVU2415 0.16 -0.6 2,523,384 + DVU2415 0.31 -0.0 2,523,414 + DVU2415 0.33 +0.1 2,523,455 - DVU2415 0.36 -0.6 2,523,483 + DVU2415 0.38 -0.5 2,523,505 + DVU2415 0.39 -0.6 2,523,517 + DVU2415 0.40 +0.2
Or see this region's nucleotide sequence