Experiment: MoLS4 with L-Serine (N), without W
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt nifA-1 and DVU1950 are separated by 3 nucleotides DVU1950 and DVU1951 overlap by 1 nucleotides
DVU1949: nifA-1 - nif-specific regulatory protein (TIGR), at 2,021,083 to 2,022,672
nifA-1
DVU1950: DVU1950 - indolepyruvate ferredoxin oxidoreductase, beta subunit, putative (TIGR), at 2,022,676 to 2,023,272
DVU1950
DVU1951: DVU1951 - indolepyruvate ferredoxin oxidoreductase, alpha subunit, putative (TIGR), at 2,023,272 to 2,025,122
DVU1951
Position (kb)
2022
2023
2024 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2021.689 kb on - strand, within nifA-1 at 2021.843 kb on + strand, within nifA-1 at 2021.937 kb on - strand, within nifA-1 at 2021.938 kb on - strand, within nifA-1 at 2021.995 kb on - strand, within nifA-1 at 2022.588 kb on - strand at 2022.861 kb on + strand, within DVU1950 at 2022.885 kb on + strand, within DVU1950 at 2022.988 kb on - strand, within DVU1950 at 2022.991 kb on + strand, within DVU1950 at 2022.999 kb on - strand, within DVU1950 at 2022.999 kb on - strand, within DVU1950 at 2023.045 kb on - strand, within DVU1950 at 2023.047 kb on + strand, within DVU1950 at 2023.204 kb on - strand, within DVU1950 at 2023.209 kb on - strand, within DVU1950 at 2023.214 kb on + strand at 2023.231 kb on - strand at 2023.242 kb on + strand at 2023.267 kb on + strand at 2023.415 kb on + strand at 2023.417 kb on + strand at 2023.460 kb on + strand, within DVU1951 at 2023.527 kb on - strand, within DVU1951 at 2023.531 kb on + strand, within DVU1951 at 2023.680 kb on - strand, within DVU1951 at 2023.807 kb on + strand, within DVU1951 at 2023.815 kb on - strand, within DVU1951 at 2023.895 kb on - strand, within DVU1951 at 2023.936 kb on - strand, within DVU1951 at 2023.977 kb on - strand, within DVU1951
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Serine (N), without W remove 2,021,689 - nifA-1 DVU1949 0.38 -3.0 2,021,843 + nifA-1 DVU1949 0.48 -2.7 2,021,937 - nifA-1 DVU1949 0.54 -1.9 2,021,938 - nifA-1 DVU1949 0.54 +0.9 2,021,995 - nifA-1 DVU1949 0.57 -0.7 2,022,588 - -1.5 2,022,861 + DVU1950 0.31 -2.6 2,022,885 + DVU1950 0.35 +0.9 2,022,988 - DVU1950 0.52 -1.0 2,022,991 + DVU1950 0.53 -1.0 2,022,999 - DVU1950 0.54 -0.8 2,022,999 - DVU1950 0.54 -0.5 2,023,045 - DVU1950 0.62 -0.5 2,023,047 + DVU1950 0.62 -1.4 2,023,204 - DVU1950 0.88 -0.3 2,023,209 - DVU1950 0.89 -1.0 2,023,214 + -1.7 2,023,231 - -0.6 2,023,242 + +0.8 2,023,267 + -2.1 2,023,415 + -3.0 2,023,417 + -1.3 2,023,460 + DVU1951 0.10 -1.5 2,023,527 - DVU1951 0.14 -0.2 2,023,531 + DVU1951 0.14 -1.1 2,023,680 - DVU1951 0.22 -0.3 2,023,807 + DVU1951 0.29 -3.9 2,023,815 - DVU1951 0.29 -1.7 2,023,895 - DVU1951 0.34 -1.9 2,023,936 - DVU1951 0.36 -1.4 2,023,977 - DVU1951 0.38 -1.5
Or see this region's nucleotide sequence