Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1338

Experiment: MoLS4 with L-Serine (N), without W

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntlon and DVU1338 are separated by 162 nucleotidesDVU1338 and DORF10632 are separated by 8 nucleotidesDORF10632 and DVU1339 are separated by 4 nucleotides DVU1337: lon - ATP-dependent protease La (TIGR), at 1,413,261 to 1,415,726 lon DVU1338: DVU1338 - conserved hypothetical protein (TIGR), at 1,415,889 to 1,416,473 DVU1338 DORF10632: DORF10632 - SEED: FIG00602944: hypothetical protein, at 1,416,482 to 1,416,769 DORF10632 DVU1339: DVU1339 - lipoprotein, putative (TIGR), at 1,416,774 to 1,417,604 DVU1339 Position (kb) 1415 1416 1417Strain fitness (log2 ratio) -1 0 1at 1414.973 kb on + strand, within lonat 1415.359 kb on + strand, within lonat 1415.415 kb on + strand, within lonat 1415.482 kb on + strandat 1415.562 kb on + strandat 1415.562 kb on + strandat 1415.686 kb on - strandat 1415.701 kb on - strandat 1415.940 kb on - strandat 1416.080 kb on + strand, within DVU1338at 1416.249 kb on - strand, within DVU1338at 1416.372 kb on - strand, within DVU1338at 1416.372 kb on - strand, within DVU1338at 1416.475 kb on - strandat 1416.575 kb on + strand, within DORF10632at 1416.583 kb on - strand, within DORF10632at 1416.646 kb on - strand, within DORF10632at 1416.659 kb on + strand, within DORF10632at 1416.769 kb on - strandat 1416.817 kb on - strandat 1416.945 kb on + strand, within DVU1339at 1416.947 kb on + strand, within DVU1339at 1416.955 kb on - strand, within DVU1339at 1417.001 kb on + strand, within DVU1339at 1417.040 kb on - strand, within DVU1339at 1417.056 kb on + strand, within DVU1339at 1417.057 kb on + strand, within DVU1339at 1417.259 kb on - strand, within DVU1339at 1417.315 kb on - strand, within DVU1339at 1417.315 kb on - strand, within DVU1339at 1417.386 kb on + strand, within DVU1339at 1417.431 kb on - strand, within DVU1339at 1417.452 kb on + strand, within DVU1339

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Per-strain Table

Position Strand Gene LocusTag Fraction MoLS4 with L-Serine (N), without W
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1,414,973 + lon DVU1337 0.69 -0.7
1,415,359 + lon DVU1337 0.85 -0.8
1,415,415 + lon DVU1337 0.87 -0.2
1,415,482 + -1.1
1,415,562 + +0.0
1,415,562 + -0.9
1,415,686 - +0.3
1,415,701 - +0.4
1,415,940 - -0.4
1,416,080 + DVU1338 0.33 +0.4
1,416,249 - DVU1338 0.62 +0.3
1,416,372 - DVU1338 0.83 -0.2
1,416,372 - DVU1338 0.83 -0.1
1,416,475 - -0.1
1,416,575 + DORF10632 0.32 +0.7
1,416,583 - DORF10632 0.35 +0.2
1,416,646 - DORF10632 0.57 +0.1
1,416,659 + DORF10632 0.61 +0.3
1,416,769 - -0.3
1,416,817 - +0.4
1,416,945 + DVU1339 0.21 +0.0
1,416,947 + DVU1339 0.21 -0.3
1,416,955 - DVU1339 0.22 -0.2
1,417,001 + DVU1339 0.27 +0.6
1,417,040 - DVU1339 0.32 +0.3
1,417,056 + DVU1339 0.34 +0.7
1,417,057 + DVU1339 0.34 +0.2
1,417,259 - DVU1339 0.58 -1.4
1,417,315 - DVU1339 0.65 -0.3
1,417,315 - DVU1339 0.65 +0.2
1,417,386 + DVU1339 0.74 +0.1
1,417,431 - DVU1339 0.79 +0.2
1,417,452 + DVU1339 0.82 -1.3

Or see this region's nucleotide sequence