Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1283

Experiment: MoLS4 with L-Serine (N), without W

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntglmM and galU are separated by 37 nucleotidesgalU and priA are separated by 75 nucleotides DVU1282: glmM - phosphoglucosamine mutase (TIGR), at 1,374,532 to 1,375,884 glmM DVU1283: galU - UTP-glucose-1-phosphate uridylyltransferase (TIGR), at 1,375,922 to 1,376,800 galU DVU1284: priA - primosomal protein n (TIGR), at 1,376,876 to 1,379,254 priA Position (kb) 1375 1376 1377Strain fitness (log2 ratio) -2 -1 0 1at 1375.886 kb on + strandat 1375.926 kb on - strandat 1375.961 kb on + strandat 1376.137 kb on + strand, within galUat 1376.380 kb on + strand, within galUat 1376.524 kb on - strand, within galUat 1376.643 kb on + strand, within galUat 1376.788 kb on - strandat 1376.833 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MoLS4 with L-Serine (N), without W
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1,375,886 + -1.2
1,375,926 - +0.2
1,375,961 + +0.3
1,376,137 + galU DVU1283 0.24 -2.5
1,376,380 + galU DVU1283 0.52 -0.4
1,376,524 - galU DVU1283 0.68 -0.4
1,376,643 + galU DVU1283 0.82 -0.9
1,376,788 - +0.3
1,376,833 + -0.9

Or see this region's nucleotide sequence