Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3659

Experiment: Nalidixic 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.025 mg/ml
3,772,508	+		Ga0059261_3657	0.62	-0.0
3,772,508	+		Ga0059261_3657	0.62	-0.4
3,772,508	+		Ga0059261_3657	0.62	-0.6
3,772,509	-		Ga0059261_3657	0.62	+1.5
3,772,509	-		Ga0059261_3657	0.62	-0.8
3,772,534	-		Ga0059261_3657	0.64	-0.3
3,772,668	+		Ga0059261_3657	0.75	+0.9
3,772,668	+		Ga0059261_3657	0.75	+1.1
3,772,668	+		Ga0059261_3657	0.75	-0.0
3,772,668	+				-1.1
3,772,668	+		Ga0059261_3657	0.75	+0.5
3,772,669	-		Ga0059261_3657	0.75	-0.1
3,772,669	-		Ga0059261_3657	0.75	+0.9
3,772,669	-		Ga0059261_3657	0.75	-0.4
3,772,670	+		Ga0059261_3657	0.75	-0.7
3,772,670	+				+1.4
3,772,670	+		Ga0059261_3657	0.75	+0.9
3,772,671	-		Ga0059261_3657	0.75	+0.2
3,772,671	-		Ga0059261_3657	0.75	+1.0
3,772,671	-				-0.1
3,772,671	-		Ga0059261_3657	0.75	+0.6
3,772,671	-		Ga0059261_3657	0.75	-0.5
3,772,671	-		Ga0059261_3657	0.75	-0.1
3,772,671	-		Ga0059261_3657	0.75	+0.6
3,772,671	-		Ga0059261_3657	0.75	-0.4
3,772,671	-		Ga0059261_3657	0.75	-0.1
3,772,671	-		Ga0059261_3657	0.75	-0.0
3,772,671	-				+3.2
3,772,671	-		Ga0059261_3657	0.75	+1.0
3,772,734	+		Ga0059261_3657	0.80	-0.1
3,772,851	-				-2.6
3,772,971	-				-0.7
3,772,981	+				-0.6
3,772,982	-				+0.8
3,772,982	-				+0.1
3,773,062	+				+0.7
3,773,062	+				-0.5
3,773,062	+				-0.5
3,773,062	+				+0.5
3,773,062	+				+1.0
3,773,062	+				-0.1
3,773,063	-				+0.5
3,773,063	-				-0.4
3,773,091	+				-0.0
3,773,257	+		Ga0059261_3658	0.46	+0.1
3,773,257	+		Ga0059261_3658	0.46	+0.1
3,773,257	+		Ga0059261_3658	0.46	+0.5
3,773,257	+		Ga0059261_3658	0.46	+0.4
3,773,257	+				-0.7
3,773,257	+				+1.7
3,773,257	+		Ga0059261_3658	0.46	-0.5
3,773,258	-		Ga0059261_3658	0.46	+0.3
3,773,258	-		Ga0059261_3658	0.46	-0.2
3,773,258	-		Ga0059261_3658	0.46	+0.5
3,773,258	-		Ga0059261_3658	0.46	-0.4
3,773,258	-		Ga0059261_3658	0.46	+0.4
3,773,258	-		Ga0059261_3658	0.46	+1.5
3,773,258	-		Ga0059261_3658	0.46	+0.5
3,773,258	-		Ga0059261_3658	0.46	+1.1
3,773,258	-		Ga0059261_3658	0.46	+0.5
3,773,258	-		Ga0059261_3658	0.46	+2.9
3,773,258	-		Ga0059261_3658	0.46	+0.4
3,773,258	-		Ga0059261_3658	0.46	+0.4
3,773,258	-		Ga0059261_3658	0.46	+0.5
3,773,259	+		Ga0059261_3658	0.46	+1.2
3,773,260	-		Ga0059261_3658	0.46	+0.7
3,773,260	-		Ga0059261_3658	0.46	+0.0
3,773,260	-		Ga0059261_3658	0.46	+0.5
3,773,401	+		Ga0059261_3658	0.80	+0.7
3,773,401	+		Ga0059261_3658	0.80	-0.7
3,773,401	+		Ga0059261_3658	0.80	+0.2
3,773,402	-		Ga0059261_3658	0.81	+0.5
3,773,402	-		Ga0059261_3658	0.81	+0.3
3,773,402	-		Ga0059261_3658	0.81	+1.3
3,773,403	+		Ga0059261_3658	0.81	-0.0
3,773,403	+		Ga0059261_3658	0.81	+0.5
3,773,403	+		Ga0059261_3658	0.81	+0.0
3,773,403	+		Ga0059261_3658	0.81	+0.2
3,773,404	-		Ga0059261_3658	0.81	-0.9
3,773,404	-		Ga0059261_3658	0.81	+0.2
3,773,410	+		Ga0059261_3658	0.83	-0.4
3,773,410	+		Ga0059261_3658	0.83	+0.9
3,773,410	+		Ga0059261_3658	0.83	+0.4
3,773,410	+		Ga0059261_3658	0.83	+0.9
3,773,410	+		Ga0059261_3658	0.83	+0.6
3,773,410	+		Ga0059261_3658	0.83	+0.2
3,773,410	+		Ga0059261_3658	0.83	+0.3
3,773,410	+		Ga0059261_3658	0.83	-0.2
3,773,410	+		Ga0059261_3658	0.83	+0.6
3,773,410	+		Ga0059261_3658	0.83	+0.9
3,773,410	+		Ga0059261_3658	0.83	+0.9
3,773,410	+		Ga0059261_3658	0.83	-0.8
3,773,410	+		Ga0059261_3658	0.83	+0.0
3,773,410	+		Ga0059261_3658	0.83	+1.1
3,773,410	+		Ga0059261_3658	0.83	-0.2
3,773,410	+		Ga0059261_3658	0.83	+0.2
3,773,410	+		Ga0059261_3658	0.83	-0.1
3,773,410	+		Ga0059261_3658	0.83	+0.4
3,773,410	+		Ga0059261_3658	0.83	+0.7
3,773,410	+		Ga0059261_3658	0.83	+0.0
3,773,410	+		Ga0059261_3658	0.83	+0.7
3,773,411	-		Ga0059261_3658	0.83	-0.0
3,773,411	-		Ga0059261_3658	0.83	-0.5
3,773,411	-		Ga0059261_3658	0.83	+0.0
3,773,411	-		Ga0059261_3658	0.83	-0.7
3,773,411	-		Ga0059261_3658	0.83	-0.4
3,773,411	-		Ga0059261_3658	0.83	+0.4
3,773,411	-		Ga0059261_3658	0.83	+0.6
3,773,411	-		Ga0059261_3658	0.83	-0.1
3,773,411	-		Ga0059261_3658	0.83	-0.1
3,773,411	-		Ga0059261_3658	0.83	+0.1
3,773,411	-		Ga0059261_3658	0.83	+0.1
3,773,411	-		Ga0059261_3658	0.83	+0.2
3,773,411	-		Ga0059261_3658	0.83	-0.6
3,773,411	-		Ga0059261_3658	0.83	+0.2
3,773,412	+		Ga0059261_3658	0.83	+0.2
3,773,413	-		Ga0059261_3658	0.83	-0.3
3,773,413	-		Ga0059261_3658	0.83	+0.1
3,773,446	-				+0.5
3,773,446	-				-0.5
3,773,446	-				+0.6
3,773,535	-		Ga0059261_3659	0.16	+0.3
3,773,535	-		Ga0059261_3659	0.16	+1.6
3,773,560	+		Ga0059261_3659	0.26	+0.0
3,773,560	+		Ga0059261_3659	0.26	+0.1
3,773,561	-		Ga0059261_3659	0.26	+0.4
3,773,561	-		Ga0059261_3659	0.26	+0.2
3,773,561	-		Ga0059261_3659	0.26	-0.6
3,773,640	+		Ga0059261_3659	0.55	+0.5
3,773,640	+		Ga0059261_3659	0.55	+0.6
3,773,641	-		Ga0059261_3659	0.56	+1.1
3,773,850	+		Ga0059261_3660	0.10	-0.7
3,773,850	+		Ga0059261_3660	0.10	+1.1
3,773,851	-		Ga0059261_3660	0.11	-0.0
3,773,851	-		Ga0059261_3660	0.11	-1.0
3,773,851	-		Ga0059261_3660	0.11	+0.1
3,773,851	-		Ga0059261_3660	0.11	+0.7
3,773,860	-		Ga0059261_3660	0.12	-0.3
3,773,860	-		Ga0059261_3660	0.12	+0.4
3,773,967	-		Ga0059261_3660	0.24	-0.6
3,774,131	+		Ga0059261_3660	0.43	-0.6
3,774,132	-		Ga0059261_3660	0.43	+0.8
3,774,220	+		Ga0059261_3660	0.53	+0.1
3,774,220	+		Ga0059261_3660	0.53	-1.2
3,774,220	+		Ga0059261_3660	0.53	-0.6
3,774,220	+		Ga0059261_3660	0.53	+0.6
3,774,220	+		Ga0059261_3660	0.53	+0.0
3,774,220	+		Ga0059261_3660	0.53	-0.7
3,774,220	+		Ga0059261_3660	0.53	-0.4
3,774,220	+		Ga0059261_3660	0.53	-0.1
3,774,220	+		Ga0059261_3660	0.53	-0.1
3,774,220	+		Ga0059261_3660	0.53	+0.2
3,774,221	-		Ga0059261_3660	0.53	+0.2
3,774,221	-		Ga0059261_3660	0.53	-0.9
3,774,221	-		Ga0059261_3660	0.53	-0.8
3,774,221	-		Ga0059261_3660	0.53	-0.0
3,774,221	-		Ga0059261_3660	0.53	-0.4
3,774,221	-		Ga0059261_3660	0.53	+0.9
3,774,221	-		Ga0059261_3660	0.53	+0.2
3,774,221	-		Ga0059261_3660	0.53	+0.6
3,774,221	-		Ga0059261_3660	0.53	+0.7
3,774,221	-		Ga0059261_3660	0.53	+0.5
3,774,221	-		Ga0059261_3660	0.53	-0.9
3,774,221	-		Ga0059261_3660	0.53	+0.3
3,774,489	+		Ga0059261_3660	0.84	+0.3
3,774,489	+		Ga0059261_3660	0.84	-0.8
3,774,489	+		Ga0059261_3660	0.84	+0.6
3,774,489	+		Ga0059261_3660	0.84	-0.1
3,774,489	+		Ga0059261_3660	0.84	+0.3
3,774,490	-		Ga0059261_3660	0.84	-0.2
3,774,490	-		Ga0059261_3660	0.84	-0.0
3,774,490	-		Ga0059261_3660	0.84	-0.3
3,774,490	-		Ga0059261_3660	0.84	+0.5