Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3374

Experiment: Nalidixic 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.025 mg/ml
3,501,017	+		Ga0059261_3372	0.73	-0.6
3,501,034	+		Ga0059261_3372	0.74	-0.1
3,501,034	+		Ga0059261_3372	0.74	+0.1
3,501,034	+		Ga0059261_3372	0.74	-0.4
3,501,035	-				+0.9
3,501,035	-		Ga0059261_3372	0.75	+0.1
3,501,371	+				+0.0
3,501,371	+				-0.3
3,501,372	-				+0.9
3,501,389	-				+0.3
3,501,403	+				-0.3
3,501,403	+				+1.2
3,501,403	+				-0.4
3,501,404	-				-1.2
3,501,404	-				-0.0
3,501,404	-				-0.3
3,501,404	-				-0.3
3,501,498	+				-0.1
3,501,499	-				+1.1
3,501,499	-				+0.2
3,501,499	-				+0.9
3,501,502	+				+0.4
3,501,502	+				-0.2
3,501,502	+				-0.9
3,501,502	+				+0.4
3,501,502	+				+1.9
3,501,502	+				+0.3
3,501,503	-				+1.5
3,501,503	-				-0.1
3,501,503	-				-0.0
3,501,503	-				-0.3
3,501,503	-				-0.3
3,501,503	-				+0.2
3,501,503	-				-0.0
3,501,518	-				+0.1
3,501,532	-				+0.3
3,501,532	-				+0.8
3,501,577	+		Ga0059261_3373	0.11	-0.9
3,501,577	+		Ga0059261_3373	0.11	+0.6
3,501,577	+		Ga0059261_3373	0.11	+0.3
3,501,578	-		Ga0059261_3373	0.11	-0.2
3,501,596	+				-0.7
3,501,596	+		Ga0059261_3373	0.17	-1.4
3,501,596	+		Ga0059261_3373	0.17	+0.6
3,501,596	+		Ga0059261_3373	0.17	-0.2
3,501,596	+		Ga0059261_3373	0.17	+0.5
3,501,596	+		Ga0059261_3373	0.17	+0.1
3,501,597	-		Ga0059261_3373	0.17	-1.6
3,501,597	-		Ga0059261_3373	0.17	+0.2
3,501,597	-		Ga0059261_3373	0.17	+1.1
3,501,597	-		Ga0059261_3373	0.17	+0.2
3,501,597	-		Ga0059261_3373	0.17	+0.9
3,501,597	-		Ga0059261_3373	0.17	+0.1
3,501,597	-		Ga0059261_3373	0.17	-0.4
3,501,597	-		Ga0059261_3373	0.17	+0.6
3,501,597	-		Ga0059261_3373	0.17	-0.1
3,501,627	+		Ga0059261_3373	0.25	-0.4
3,501,628	-		Ga0059261_3373	0.25	-0.5
3,501,807	+		Ga0059261_3373	0.76	-0.9
3,501,807	+		Ga0059261_3373	0.76	-0.2
3,501,808	-		Ga0059261_3373	0.76	-0.3
3,501,834	+		Ga0059261_3373	0.83	+0.0
3,501,834	+		Ga0059261_3373	0.83	-0.2
3,501,834	+		Ga0059261_3373	0.83	-0.3
3,501,834	+		Ga0059261_3373	0.83	-0.7
3,501,834	+		Ga0059261_3373	0.83	+0.7
3,501,835	-		Ga0059261_3373	0.83	+0.1
3,501,835	-		Ga0059261_3373	0.83	-0.3
3,501,835	-		Ga0059261_3373	0.83	-0.1
3,501,835	-		Ga0059261_3373	0.83	+0.1
3,501,835	-				+1.5
3,501,835	-		Ga0059261_3373	0.83	-2.4
3,501,846	+		Ga0059261_3373	0.87	-0.3
3,501,847	-		Ga0059261_3373	0.87	+0.3
3,502,065	+				+0.5
3,502,065	+				-1.9
3,502,065	+				-0.1
3,502,066	-				-1.7
3,502,066	-				+0.5
3,502,066	-				-0.6
3,502,066	-				+0.2
3,502,066	-				-0.8
3,502,067	+				+0.8
3,502,067	+				+0.7
3,502,067	+				+0.7
3,502,067	+				+0.2
3,502,067	+				-0.2
3,502,067	+				-0.1
3,502,067	+				-0.1
3,502,067	+				-0.7
3,502,068	-				-0.2
3,502,068	-				+0.5
3,502,068	-				+0.7
3,502,068	-				-0.3
3,502,068	-				-0.1
3,502,068	-				+0.1
3,502,068	-				-0.5
3,502,068	-				+0.1
3,502,068	-				+0.4
3,502,068	-				+0.1
3,502,068	-				+1.1
3,502,145	+		Ga0059261_3374	0.15	-1.3
3,502,145	+		Ga0059261_3374	0.15	+0.7
3,502,145	+		Ga0059261_3374	0.15	-0.7
3,502,145	+		Ga0059261_3374	0.15	+0.4
3,502,146	-		Ga0059261_3374	0.15	+0.6
3,502,283	+		Ga0059261_3374	0.24	-0.0
3,502,284	-		Ga0059261_3374	0.25	+0.8
3,502,855	+		Ga0059261_3374	0.65	+0.9
3,502,855	+		Ga0059261_3374	0.65	+0.2
3,502,856	-		Ga0059261_3374	0.65	+0.2
3,502,856	-				+0.9
3,502,856	-		Ga0059261_3374	0.65	+0.9
3,503,129	+		Ga0059261_3374	0.84	+0.2
3,503,130	-		Ga0059261_3374	0.84	-1.4
3,503,334	+				+2.2
3,503,334	+				-0.1
3,503,334	+				+0.2
3,503,334	+				+1.3
3,503,335	-				+0.3
3,503,335	-				+0.6
3,503,335	-				-0.6
3,503,335	-				+0.5
3,503,335	-				-0.9
3,503,336	+				-1.3
3,503,336	+				+0.8
3,503,336	+				-0.3
3,503,336	+				-0.9
3,503,336	+				-0.2
3,503,336	+				-0.5
3,503,337	-				-0.3
3,503,337	-				-0.1
3,503,337	-				-0.1
3,503,337	-				+0.3
3,503,337	-				-0.1
3,503,348	+				-0.2
3,503,348	+				+0.4
3,503,349	-				-0.2
3,503,349	-				+0.1
3,503,349	-				+0.5
3,503,396	+				-0.0
3,503,396	+				+0.7
3,503,397	-				+0.4
3,503,397	-				-0.1
3,503,397	-				+0.9
3,503,581	+		Ga0059261_3375	0.14	-0.2
3,503,581	+		Ga0059261_3375	0.14	+0.4
3,503,581	+		Ga0059261_3375	0.14	-0.3
3,503,581	+		Ga0059261_3375	0.14	-0.1
3,503,581	+				-0.1
3,503,581	+		Ga0059261_3375	0.14	+0.2
3,503,581	+		Ga0059261_3375	0.14	-0.4
3,503,581	+		Ga0059261_3375	0.14	+0.6
3,503,581	+		Ga0059261_3375	0.14	-0.2
3,503,581	+				-0.1
3,503,582	-		Ga0059261_3375	0.14	-0.2
3,503,582	-		Ga0059261_3375	0.14	+0.9
3,503,582	-		Ga0059261_3375	0.14	-0.3
3,503,582	-		Ga0059261_3375	0.14	-0.5
3,503,607	-		Ga0059261_3375	0.17	-1.1
3,503,704	+		Ga0059261_3375	0.26	-0.4
3,503,704	+		Ga0059261_3375	0.26	+1.5
3,503,704	+		Ga0059261_3375	0.26	-0.0
3,503,704	+		Ga0059261_3375	0.26	-0.5
3,503,704	+		Ga0059261_3375	0.26	+0.6
3,503,704	+		Ga0059261_3375	0.26	-0.1
3,503,704	+		Ga0059261_3375	0.26	-0.6
3,503,704	+				-1.1
3,503,704	+		Ga0059261_3375	0.26	-1.1
3,503,704	+		Ga0059261_3375	0.26	-0.0
3,503,704	+				-1.1
3,503,705	-		Ga0059261_3375	0.27	-0.4
3,503,705	-		Ga0059261_3375	0.27	-0.4
3,503,705	-		Ga0059261_3375	0.27	-1.6
3,503,705	-		Ga0059261_3375	0.27	+0.9
3,503,705	-		Ga0059261_3375	0.27	+0.3
3,503,705	-		Ga0059261_3375	0.27	+0.1
3,503,705	-		Ga0059261_3375	0.27	-1.4
3,503,705	-		Ga0059261_3375	0.27	+0.6
3,503,705	-		Ga0059261_3375	0.27	-1.6
3,503,705	-		Ga0059261_3375	0.27	+0.2
3,503,811	+		Ga0059261_3375	0.37	+1.1
3,503,812	-		Ga0059261_3375	0.38	+0.1
3,503,812	-		Ga0059261_3375	0.38	-0.0
3,503,812	-		Ga0059261_3375	0.38	-0.6
3,503,812	-		Ga0059261_3375	0.38	+0.4
3,503,830	+		Ga0059261_3375	0.39	+1.2
3,504,016	+		Ga0059261_3375	0.58	+0.2
3,504,017	-				-0.1
3,504,191	+		Ga0059261_3375	0.76	+0.7
3,504,191	+		Ga0059261_3375	0.76	-0.3
3,504,192	-		Ga0059261_3375	0.77	+0.3
3,504,192	-		Ga0059261_3375	0.77	-0.8
3,504,241	+				+0.1
3,504,241	+		Ga0059261_3375	0.82	+0.6
3,504,241	+		Ga0059261_3375	0.82	-0.2
3,504,241	+		Ga0059261_3375	0.82	+0.1
3,504,242	-		Ga0059261_3375	0.82	+0.5
3,504,242	-		Ga0059261_3375	0.82	-0.9
3,504,242	-		Ga0059261_3375	0.82	-0.6
3,504,242	-		Ga0059261_3375	0.82	-0.3
3,504,242	-		Ga0059261_3375	0.82	-0.2
3,504,242	-		Ga0059261_3375	0.82	+0.9
3,504,242	-		Ga0059261_3375	0.82	-2.1
3,504,242	-		Ga0059261_3375	0.82	+0.4
3,504,242	-		Ga0059261_3375	0.82	-1.4
3,504,247	+		Ga0059261_3375	0.82	-0.0
3,504,247	+		Ga0059261_3375	0.82	+0.1
3,504,247	+		Ga0059261_3375	0.82	-0.4
3,504,247	+		Ga0059261_3375	0.82	+1.2
3,504,247	+		Ga0059261_3375	0.82	+1.1
3,504,248	-		Ga0059261_3375	0.82	-0.2
3,504,248	-		Ga0059261_3375	0.82	+0.1
3,504,248	-		Ga0059261_3375	0.82	-0.4
3,504,248	-		Ga0059261_3375	0.82	-0.2
3,504,248	-		Ga0059261_3375	0.82	+0.1
3,504,248	-		Ga0059261_3375	0.82	+0.4
3,504,248	-		Ga0059261_3375	0.82	+0.6
3,504,248	-		Ga0059261_3375	0.82	-0.6
3,504,250	+		Ga0059261_3375	0.82	+0.1
3,504,250	+		Ga0059261_3375	0.82	+0.0
3,504,251	-		Ga0059261_3375	0.83	+0.7
3,504,251	-		Ga0059261_3375	0.83	+0.0
3,504,251	-		Ga0059261_3375	0.83	-0.2
3,504,251	-		Ga0059261_3375	0.83	-0.1
3,504,251	-		Ga0059261_3375	0.83	-0.3
3,504,251	-		Ga0059261_3375	0.83	+0.2