Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3033

Experiment: Nalidixic 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.025 mg/ml
3,164,856	+		Ga0059261_3032	0.22	+0.9
3,164,856	+		Ga0059261_3032	0.22	-0.1
3,164,857	-		Ga0059261_3032	0.22	+0.5
3,164,857	-		Ga0059261_3032	0.22	-0.4
3,164,939	+		Ga0059261_3032	0.29	+0.9
3,164,939	+		Ga0059261_3032	0.29	+0.4
3,164,940	-		Ga0059261_3032	0.29	-0.3
3,165,099	+		Ga0059261_3032	0.42	+1.3
3,165,099	+		Ga0059261_3032	0.42	-1.0
3,165,099	+		Ga0059261_3032	0.42	-0.5
3,165,241	+		Ga0059261_3032	0.54	-0.0
3,165,241	+		Ga0059261_3032	0.54	+0.0
3,165,242	-				-0.7
3,165,242	-		Ga0059261_3032	0.54	+0.7
3,165,242	-		Ga0059261_3032	0.54	-0.2
3,165,243	+		Ga0059261_3032	0.54	-1.4
3,165,243	+		Ga0059261_3032	0.54	-0.9
3,165,243	+		Ga0059261_3032	0.54	-0.3
3,165,243	+		Ga0059261_3032	0.54	-0.0
3,165,243	+		Ga0059261_3032	0.54	-0.0
3,165,243	+		Ga0059261_3032	0.54	-0.2
3,165,243	+		Ga0059261_3032	0.54	+1.1
3,165,243	+				+0.3
3,165,243	+		Ga0059261_3032	0.54	+0.3
3,165,243	+		Ga0059261_3032	0.54	-2.0
3,165,243	+		Ga0059261_3032	0.54	-0.1
3,165,244	-		Ga0059261_3032	0.54	+0.6
3,165,244	-		Ga0059261_3032	0.54	-0.1
3,165,244	-		Ga0059261_3032	0.54	-0.1
3,165,244	-		Ga0059261_3032	0.54	-0.5
3,165,244	-		Ga0059261_3032	0.54	-0.6
3,165,244	-		Ga0059261_3032	0.54	-0.1
3,165,244	-		Ga0059261_3032	0.54	-0.1
3,165,244	-		Ga0059261_3032	0.54	-0.1
3,165,244	-		Ga0059261_3032	0.54	+0.3
3,165,244	-		Ga0059261_3032	0.54	-0.1
3,165,244	-		Ga0059261_3032	0.54	+0.3
3,165,244	-		Ga0059261_3032	0.54	+0.6
3,165,244	-		Ga0059261_3032	0.54	+0.2
3,165,244	-		Ga0059261_3032	0.54	-0.4
3,165,244	-		Ga0059261_3032	0.54	-0.1
3,165,258	+		Ga0059261_3032	0.56	-1.1
3,165,258	+		Ga0059261_3032	0.56	-0.3
3,165,259	-		Ga0059261_3032	0.56	-0.2
3,165,259	-		Ga0059261_3032	0.56	+0.9
3,165,259	-		Ga0059261_3032	0.56	+1.9
3,165,259	-		Ga0059261_3032	0.56	-0.1
3,165,283	+		Ga0059261_3032	0.58	+0.3
3,165,283	+		Ga0059261_3032	0.58	+0.2
3,165,284	-		Ga0059261_3032	0.58	-1.0
3,165,284	-		Ga0059261_3032	0.58	-0.1
3,165,284	-		Ga0059261_3032	0.58	-0.0
3,165,284	-		Ga0059261_3032	0.58	+0.5
3,165,284	-				+0.9
3,165,284	-		Ga0059261_3032	0.58	-0.1
3,165,354	+		Ga0059261_3032	0.64	-0.2
3,165,354	+		Ga0059261_3032	0.64	-0.0
3,165,354	+		Ga0059261_3032	0.64	-0.7
3,165,355	-		Ga0059261_3032	0.64	+0.2
3,165,355	-		Ga0059261_3032	0.64	-0.2
3,165,355	-		Ga0059261_3032	0.64	-1.1
3,165,355	-		Ga0059261_3032	0.64	+0.3
3,165,355	-		Ga0059261_3032	0.64	+0.9
3,165,381	+		Ga0059261_3032	0.66	-0.4
3,165,381	+		Ga0059261_3032	0.66	+1.3
3,165,381	+		Ga0059261_3032	0.66	-0.4
3,165,381	+		Ga0059261_3032	0.66	+0.3
3,165,381	+		Ga0059261_3032	0.66	-0.0
3,165,381	+		Ga0059261_3032	0.66	-0.8
3,165,381	+		Ga0059261_3032	0.66	+0.6
3,165,381	+		Ga0059261_3032	0.66	-0.1
3,165,381	+		Ga0059261_3032	0.66	+0.7
3,165,381	+		Ga0059261_3032	0.66	-0.4
3,165,382	-		Ga0059261_3032	0.66	+0.2
3,165,382	-		Ga0059261_3032	0.66	+0.3
3,165,382	-		Ga0059261_3032	0.66	+0.3
3,165,382	-		Ga0059261_3032	0.66	+0.4
3,165,382	-				+0.9
3,165,382	-		Ga0059261_3032	0.66	-0.1
3,165,382	-		Ga0059261_3032	0.66	-0.2
3,165,382	-		Ga0059261_3032	0.66	-1.1
3,165,382	-		Ga0059261_3032	0.66	-0.1
3,165,382	-		Ga0059261_3032	0.66	-0.1
3,165,382	-		Ga0059261_3032	0.66	+0.8
3,165,464	+		Ga0059261_3032	0.73	+1.1
3,165,485	+		Ga0059261_3032	0.74	-0.7
3,165,485	+		Ga0059261_3032	0.74	+1.5
3,165,485	+		Ga0059261_3032	0.74	-1.0
3,165,485	+		Ga0059261_3032	0.74	+2.8
3,165,486	-		Ga0059261_3032	0.75	+0.8
3,165,486	-		Ga0059261_3032	0.75	-0.8
3,165,486	-		Ga0059261_3032	0.75	-0.3
3,165,486	-		Ga0059261_3032	0.75	+1.1
3,165,618	+		Ga0059261_3032	0.86	-0.7
3,165,619	-		Ga0059261_3032	0.86	+0.2
3,165,619	-		Ga0059261_3032	0.86	+0.6
3,165,619	-		Ga0059261_3032	0.86	+0.5
3,165,619	-		Ga0059261_3032	0.86	-1.2
3,165,654	+		Ga0059261_3032	0.89	-0.8
3,165,654	+		Ga0059261_3032	0.89	+0.6
3,165,655	-		Ga0059261_3032	0.89	+0.2
3,165,679	+				-2.1
3,165,679	+				-0.7
3,165,679	+				+0.9
3,165,679	+				+0.1
3,165,680	-				-0.5
3,165,680	-				-0.3
3,165,680	-				-0.1
3,165,680	-				+0.0
3,165,727	+				+0.1
3,165,727	+				+0.6
3,165,727	+				+0.4
3,165,727	+				-0.1
3,165,727	+				-0.1
3,165,727	+				-0.2
3,165,727	+				+0.0
3,165,727	+				+0.1
3,165,727	+				-0.6
3,165,727	+				+1.6
3,165,728	-				+0.1
3,165,728	-				-0.7
3,165,728	-				+0.3
3,165,729	+				-0.3
3,165,729	+				+0.5
3,165,729	+				+0.9
3,165,729	+				-1.2
3,165,729	+				+0.9
3,165,729	+				-1.7
3,165,729	+				-0.2
3,165,729	+				-0.3
3,165,729	+				+0.2
3,165,729	+				-0.1
3,165,729	+				-0.5
3,165,729	+				+0.3
3,165,729	+				-0.2
3,165,729	+				-0.2
3,165,730	-				+0.5
3,165,730	-				+0.8
3,165,730	-				+0.2
3,165,746	-				-0.0
3,166,266	+		Ga0059261_3033	0.19	+0.2
3,166,267	-		Ga0059261_3033	0.19	+2.5
3,166,526	+		Ga0059261_3033	0.30	+0.0
3,166,606	+		Ga0059261_3033	0.33	+0.9
3,166,606	+		Ga0059261_3033	0.33	+0.4
3,166,607	-		Ga0059261_3033	0.33	-0.9
3,166,607	-		Ga0059261_3033	0.33	-0.2
3,166,607	-		Ga0059261_3033	0.33	-0.7
3,166,681	-		Ga0059261_3033	0.36	-0.7
3,166,878	-		Ga0059261_3033	0.44	+0.6
3,166,878	-		Ga0059261_3033	0.44	-0.2
3,166,878	-		Ga0059261_3033	0.44	+0.3
3,166,885	-		Ga0059261_3033	0.44	-0.4
3,167,120	+		Ga0059261_3033	0.54	-0.1
3,167,121	-		Ga0059261_3033	0.54	+0.7
3,167,411	+		Ga0059261_3033	0.66	+0.1
3,167,411	+		Ga0059261_3033	0.66	+0.2
3,167,411	+		Ga0059261_3033	0.66	-0.4
3,167,411	+		Ga0059261_3033	0.66	+0.4
3,167,411	+		Ga0059261_3033	0.66	-0.2
3,167,411	+		Ga0059261_3033	0.66	-0.3
3,167,411	+		Ga0059261_3033	0.66	+1.0
3,167,411	+		Ga0059261_3033	0.66	+0.8
3,167,412	-		Ga0059261_3033	0.66	+1.1
3,167,412	-		Ga0059261_3033	0.66	-0.1
3,167,412	-		Ga0059261_3033	0.66	+0.1
3,167,412	-		Ga0059261_3033	0.66	+0.5
3,167,412	-		Ga0059261_3033	0.66	-1.1
3,167,525	-		Ga0059261_3033	0.70	-2.0
3,167,585	+		Ga0059261_3033	0.73	-0.0
3,167,597	+		Ga0059261_3033	0.73	+0.8
3,167,597	+		Ga0059261_3033	0.73	+0.3
3,167,597	+		Ga0059261_3033	0.73	-1.0
3,167,597	+		Ga0059261_3033	0.73	+0.4
3,167,597	+		Ga0059261_3033	0.73	+0.1
3,167,597	+		Ga0059261_3033	0.73	+0.6
3,167,597	+		Ga0059261_3033	0.73	+0.4
3,167,597	+		Ga0059261_3033	0.73	-0.2
3,167,597	+		Ga0059261_3033	0.73	+0.9
3,167,598	-		Ga0059261_3033	0.73	-0.1
3,167,598	-		Ga0059261_3033	0.73	-0.3
3,167,598	-		Ga0059261_3033	0.73	+0.4
3,167,598	-		Ga0059261_3033	0.73	+1.2
3,167,598	-		Ga0059261_3033	0.73	-0.0
3,168,092	+				+0.2
3,168,092	+				-1.7
3,168,092	+				-0.2
3,168,093	-				+0.9
3,168,093	-				-0.8
3,168,229	+				-0.4
3,168,229	+				-0.5
3,168,229	+				+0.3
3,168,229	+				-0.7
3,168,230	-				+1.2
3,168,230	-				+0.3
3,168,230	-				-0.6
3,168,237	+				+0.1
3,168,237	+				-0.9
3,168,250	+				-0.2
3,168,250	+				+0.7
3,168,250	+				+0.5
3,168,251	-				-1.4
3,168,251	-				+0.0
3,168,251	-				+0.1
3,168,251	-				+0.4
3,168,251	-				-0.5
3,168,251	-				-2.0
3,168,299	+				-0.3
3,168,300	-				+0.1
3,168,492	+		Ga0059261_3034	0.39	+0.9
3,168,492	+		Ga0059261_3034	0.39	+0.2
3,168,492	+		Ga0059261_3034	0.39	+0.6
3,168,493	-		Ga0059261_3034	0.39	+0.7
3,168,511	+		Ga0059261_3034	0.42	-1.1
3,168,511	+		Ga0059261_3034	0.42	+0.8
3,168,511	+		Ga0059261_3034	0.42	+0.4
3,168,511	+		Ga0059261_3034	0.42	+1.7
3,168,511	+		Ga0059261_3034	0.42	-0.1
3,168,512	-		Ga0059261_3034	0.42	-0.3
3,168,512	-		Ga0059261_3034	0.42	+0.1
3,168,512	-		Ga0059261_3034	0.42	+0.5
3,168,512	-		Ga0059261_3034	0.42	+1.1
3,168,512	-		Ga0059261_3034	0.42	+0.1
3,168,580	+		Ga0059261_3034	0.53	+0.2
3,168,580	+		Ga0059261_3034	0.53	-0.3
3,168,580	+		Ga0059261_3034	0.53	+0.8
3,168,580	+		Ga0059261_3034	0.53	-0.3
3,168,580	+		Ga0059261_3034	0.53	+0.4
3,168,581	-		Ga0059261_3034	0.53	+0.5
3,168,581	-		Ga0059261_3034	0.53	+0.9
3,168,581	-		Ga0059261_3034	0.53	+0.0
3,168,581	-		Ga0059261_3034	0.53	+0.1
3,168,700	+		Ga0059261_3034	0.73	+0.6
3,168,700	+		Ga0059261_3034	0.73	+0.5
3,168,700	+		Ga0059261_3034	0.73	-0.2
3,168,700	+		Ga0059261_3034	0.73	+0.5
3,168,700	+		Ga0059261_3034	0.73	-0.1
3,168,700	+				-0.1
3,168,701	-		Ga0059261_3034	0.73	+0.3
3,168,701	-		Ga0059261_3034	0.73	+0.1
3,168,701	-		Ga0059261_3034	0.73	+0.1
3,168,701	-		Ga0059261_3034	0.73	-0.7
3,168,741	+		Ga0059261_3034	0.80	+0.1
3,168,741	+		Ga0059261_3034	0.80	-0.7
3,168,742	-		Ga0059261_3034	0.80	-0.4
3,168,742	-		Ga0059261_3034	0.80	-0.2
3,168,819	+				+0.2
3,168,819	+				-0.1
3,168,819	+				+0.1
3,168,820	-				-0.1
3,168,820	-				+0.2
3,168,820	-				-0.7
3,168,820	-				+0.3
3,168,820	-				+0.2
3,168,820	-				-0.2
3,168,820	-				+0.2
3,168,820	-				+0.9
3,168,820	-				+0.4
3,168,918	+				-0.0
3,168,923	+				-0.8
3,168,923	+				-0.3
3,168,924	-				+0.6
3,168,924	-				-0.3
3,168,924	-				+0.5
3,168,974	+				+0.7
3,168,975	+				-0.4
3,168,975	+				+0.5
3,168,975	+				+0.8
3,168,975	+				-0.5
3,168,975	+				-0.3
3,168,976	-				-0.6
3,168,976	-				-0.7
3,169,007	+				+0.1
3,169,007	+				+0.0
3,169,007	+				+0.3
3,169,007	+				+0.1
3,169,008	-				+0.5
3,169,008	-				+0.2
3,169,008	-				-0.2
3,169,008	-				-0.1
3,169,010	-				-0.2
3,169,010	-				+0.7
3,169,190	+				+0.1
3,169,191	-				-0.5
3,169,191	-				-0.4
3,169,191	-				-0.5
3,169,191	-				+0.1