Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2843

Experiment: Nalidixic 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.025 mg/ml
2,952,023	+		Ga0059261_2841	0.41	-0.3
2,952,023	+		Ga0059261_2841	0.41	+0.3
2,952,024	-		Ga0059261_2841	0.41	+0.7
2,952,024	-		Ga0059261_2841	0.41	+0.0
2,952,025	+		Ga0059261_2841	0.41	+0.4
2,952,025	+		Ga0059261_2841	0.41	-0.0
2,952,025	+		Ga0059261_2841	0.41	-0.2
2,952,025	+		Ga0059261_2841	0.41	-0.2
2,952,026	-		Ga0059261_2841	0.42	-0.5
2,952,026	-		Ga0059261_2841	0.42	-0.0
2,952,026	-		Ga0059261_2841	0.42	+0.7
2,952,497	+				-0.4
2,952,497	+				-0.4
2,952,497	+				+0.5
2,952,497	+				-0.3
2,952,498	-				-0.5
2,952,498	-				-0.3
2,952,498	-				+0.4
2,952,498	-				-0.2
2,952,498	-				-0.2
2,952,498	-				-0.4
2,952,501	+				+0.6
2,952,501	+				+0.2
2,952,501	+				+0.3
2,952,501	+				+1.4
2,952,501	+				-2.2
2,952,501	+				-0.5
2,952,501	+				+0.9
2,952,501	+				+0.9
2,952,501	+				-0.7
2,952,501	+				+0.6
2,952,501	+				-0.7
2,952,501	+				-1.3
2,952,502	-				-0.3
2,952,502	-				+0.1
2,952,502	-				-0.4
2,952,502	-				-0.1
2,952,502	-				+0.6
2,952,502	-				+0.8
2,952,502	-				-0.4
2,952,502	-				-0.5
2,952,582	+		Ga0059261_2842	0.20	-0.1
2,952,582	+		Ga0059261_2842	0.20	-0.1
2,952,582	+				-0.6
2,952,582	+		Ga0059261_2842	0.20	+0.8
2,952,583	-		Ga0059261_2842	0.20	-1.3
2,952,583	-		Ga0059261_2842	0.20	-0.6
2,952,583	-		Ga0059261_2842	0.20	-1.4
2,952,583	-		Ga0059261_2842	0.20	-0.2
2,952,583	-		Ga0059261_2842	0.20	-0.1
2,952,583	-		Ga0059261_2842	0.20	-0.5
2,952,583	-		Ga0059261_2842	0.20	-0.6
2,952,583	-		Ga0059261_2842	0.20	-0.4
2,952,583	-		Ga0059261_2842	0.20	+0.2
2,952,583	-		Ga0059261_2842	0.20	+0.3
2,952,627	+		Ga0059261_2842	0.30	+0.1
2,952,627	+		Ga0059261_2842	0.30	-0.3
2,952,627	+		Ga0059261_2842	0.30	+0.2
2,952,627	+		Ga0059261_2842	0.30	-0.0
2,952,628	-		Ga0059261_2842	0.31	+0.1
2,952,628	-		Ga0059261_2842	0.31	-1.6
2,952,628	-		Ga0059261_2842	0.31	-0.6
2,952,628	-		Ga0059261_2842	0.31	+0.9
2,952,706	-		Ga0059261_2842	0.49	-0.7
2,952,858	+				+1.9
2,952,859	-		Ga0059261_2842	0.86	+0.6
2,952,859	-		Ga0059261_2842	0.86	+0.1
2,953,146	+		Ga0059261_2843	0.29	+0.4
2,953,146	+		Ga0059261_2843	0.29	-0.1
2,953,250	+		Ga0059261_2843	0.43	-0.1
2,953,250	+		Ga0059261_2843	0.43	-0.6
2,953,250	+		Ga0059261_2843	0.43	-1.1
2,953,250	+		Ga0059261_2843	0.43	+0.1
2,953,250	+		Ga0059261_2843	0.43	+1.0
2,953,250	+				+1.5
2,953,251	-		Ga0059261_2843	0.43	-0.1
2,953,251	-		Ga0059261_2843	0.43	+1.0
2,953,251	-		Ga0059261_2843	0.43	+0.1
2,953,251	-		Ga0059261_2843	0.43	+0.1
2,953,251	-		Ga0059261_2843	0.43	+0.9
2,953,251	-		Ga0059261_2843	0.43	-0.1
2,953,251	-				-0.1
2,953,251	-		Ga0059261_2843	0.43	+0.2
2,953,596	+		Ga0059261_2843	0.86	+0.9
2,953,705	+				-0.4
2,953,705	+				-0.1
2,953,706	-				-0.1
2,953,706	-				+1.2
2,953,706	-				+0.5
2,953,706	-				+0.3
2,953,706	-				+0.1
2,953,706	-				-0.9
2,953,706	-				-0.7
2,953,819	-				+0.2
2,953,830	+				+0.5
2,953,868	+				-0.3
2,953,868	+				+0.3
2,953,868	+				-0.1
2,953,868	+				+1.4
2,953,868	+				-1.3
2,953,868	+				+0.7
2,953,869	-				-0.1
2,953,977	+		Ga0059261_2844	0.11	-1.5
2,953,977	+		Ga0059261_2844	0.11	-0.0
2,953,977	+		Ga0059261_2844	0.11	+0.1
2,953,978	-		Ga0059261_2844	0.11	-1.1
2,953,978	-		Ga0059261_2844	0.11	-0.1
2,953,978	-		Ga0059261_2844	0.11	+0.7
2,953,978	-		Ga0059261_2844	0.11	-0.3
2,953,978	-		Ga0059261_2844	0.11	+0.2
2,953,978	-		Ga0059261_2844	0.11	-0.1
2,954,131	+		Ga0059261_2844	0.26	+0.0
2,954,167	+		Ga0059261_2844	0.29	-0.1
2,954,167	+		Ga0059261_2844	0.29	+0.2
2,954,167	+		Ga0059261_2844	0.29	+0.4
2,954,167	+		Ga0059261_2844	0.29	+0.1
2,954,167	+		Ga0059261_2844	0.29	+0.1
2,954,167	+		Ga0059261_2844	0.29	+0.6
2,954,167	+		Ga0059261_2844	0.29	+0.2
2,954,167	+		Ga0059261_2844	0.29	+0.4
2,954,168	-		Ga0059261_2844	0.29	-0.1
2,954,168	-		Ga0059261_2844	0.29	-0.2
2,954,168	-		Ga0059261_2844	0.29	+0.3
2,954,168	-		Ga0059261_2844	0.29	-0.2
2,954,168	-		Ga0059261_2844	0.29	+0.5
2,954,168	-		Ga0059261_2844	0.29	+0.3
2,954,168	-		Ga0059261_2844	0.29	-0.1
2,954,245	-		Ga0059261_2844	0.36	-0.4
2,954,263	+		Ga0059261_2844	0.38	+0.1
2,954,263	+		Ga0059261_2844	0.38	-0.0
2,954,263	+		Ga0059261_2844	0.38	-1.6
2,954,263	+		Ga0059261_2844	0.38	-0.3
2,954,263	+		Ga0059261_2844	0.38	+1.7
2,954,263	+		Ga0059261_2844	0.38	+0.5
2,954,264	-		Ga0059261_2844	0.38	-0.5
2,954,264	-		Ga0059261_2844	0.38	-0.4
2,954,264	-		Ga0059261_2844	0.38	+0.7
2,954,264	-		Ga0059261_2844	0.38	-0.1
2,954,264	-		Ga0059261_2844	0.38	+0.2
2,954,264	-		Ga0059261_2844	0.38	-0.1
2,954,314	+		Ga0059261_2844	0.43	+0.4
2,954,314	+		Ga0059261_2844	0.43	+0.4
2,954,314	+		Ga0059261_2844	0.43	+0.2
2,954,314	+		Ga0059261_2844	0.43	-0.1
2,954,314	+		Ga0059261_2844	0.43	+0.9
2,954,314	+		Ga0059261_2844	0.43	-0.0
2,954,314	+		Ga0059261_2844	0.43	+0.9
2,954,315	-		Ga0059261_2844	0.43	-0.3
2,954,315	-		Ga0059261_2844	0.43	+1.2
2,954,315	-		Ga0059261_2844	0.43	+0.4
2,954,315	-		Ga0059261_2844	0.43	+0.1
2,954,315	-		Ga0059261_2844	0.43	+0.1
2,954,315	-		Ga0059261_2844	0.43	-0.1
2,954,315	-		Ga0059261_2844	0.43	+0.2
2,954,315	-		Ga0059261_2844	0.43	-0.1
2,954,315	-		Ga0059261_2844	0.43	+0.4
2,954,339	-		Ga0059261_2844	0.45	-0.9
2,954,401	+		Ga0059261_2844	0.51	+0.6
2,954,402	-		Ga0059261_2844	0.51	-1.7
2,954,452	+		Ga0059261_2844	0.56	+0.7
2,954,452	+		Ga0059261_2844	0.56	+0.5
2,954,452	+		Ga0059261_2844	0.56	+0.5
2,954,452	+		Ga0059261_2844	0.56	+0.6
2,954,452	+		Ga0059261_2844	0.56	-0.7
2,954,452	+		Ga0059261_2844	0.56	+0.5
2,954,452	+		Ga0059261_2844	0.56	+0.1
2,954,452	+		Ga0059261_2844	0.56	-0.1
2,954,452	+				+2.5
2,954,453	-		Ga0059261_2844	0.56	+0.8
2,954,453	-		Ga0059261_2844	0.56	-0.2
2,954,453	-		Ga0059261_2844	0.56	-0.5
2,954,518	+		Ga0059261_2844	0.62	-0.9
2,954,518	+		Ga0059261_2844	0.62	+0.9
2,954,518	+		Ga0059261_2844	0.62	-0.1
2,954,519	-		Ga0059261_2844	0.62	-0.2
2,954,519	-		Ga0059261_2844	0.62	-0.3
2,954,519	-		Ga0059261_2844	0.62	+0.5
2,954,519	-		Ga0059261_2844	0.62	+0.1
2,954,674	+		Ga0059261_2844	0.77	-0.2
2,954,674	+		Ga0059261_2844	0.77	-1.2
2,954,675	-		Ga0059261_2844	0.77	+1.5
2,954,675	-		Ga0059261_2844	0.77	+0.3
2,954,675	-		Ga0059261_2844	0.77	-1.4