Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1208

Experiment: Nalidixic 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.025 mg/ml
1,260,611	+		Ga0059261_1207	0.18	+0.1
1,260,611	+		Ga0059261_1207	0.18	-0.4
1,260,611	+		Ga0059261_1207	0.18	-1.4
1,260,611	+		Ga0059261_1207	0.18	-0.1
1,260,612	-		Ga0059261_1207	0.18	-0.2
1,260,638	+		Ga0059261_1207	0.21	+0.5
1,260,664	+		Ga0059261_1207	0.23	+0.1
1,260,664	+		Ga0059261_1207	0.23	+0.2
1,260,665	-		Ga0059261_1207	0.23	-0.2
1,260,665	-		Ga0059261_1207	0.23	-0.0
1,260,741	+		Ga0059261_1207	0.29	-0.4
1,260,741	+		Ga0059261_1207	0.29	-0.7
1,260,741	+		Ga0059261_1207	0.29	+0.6
1,260,742	-		Ga0059261_1207	0.30	-0.5
1,260,742	-		Ga0059261_1207	0.30	+0.1
1,260,742	-		Ga0059261_1207	0.30	+0.1
1,260,793	+		Ga0059261_1207	0.34	-0.1
1,260,864	-		Ga0059261_1207	0.40	-0.6
1,260,889	-		Ga0059261_1207	0.42	+0.8
1,260,889	-		Ga0059261_1207	0.42	-0.4
1,260,889	-		Ga0059261_1207	0.42	+0.4
1,260,889	-		Ga0059261_1207	0.42	+0.3
1,260,909	+		Ga0059261_1207	0.44	-0.1
1,260,909	+		Ga0059261_1207	0.44	-0.0
1,260,910	-		Ga0059261_1207	0.44	-0.3
1,260,998	+		Ga0059261_1207	0.51	-1.6
1,260,998	+		Ga0059261_1207	0.51	-0.4
1,260,998	+		Ga0059261_1207	0.51	+0.6
1,260,998	+		Ga0059261_1207	0.51	-0.3
1,260,999	-		Ga0059261_1207	0.52	-0.7
1,260,999	-		Ga0059261_1207	0.52	+1.0
1,260,999	-		Ga0059261_1207	0.52	+1.2
1,260,999	-				+0.6
1,260,999	-		Ga0059261_1207	0.52	+0.0
1,260,999	-		Ga0059261_1207	0.52	+0.3
1,260,999	-		Ga0059261_1207	0.52	-0.5
1,260,999	-		Ga0059261_1207	0.52	-0.1
1,260,999	-		Ga0059261_1207	0.52	-0.0
1,261,013	+		Ga0059261_1207	0.53	-0.3
1,261,013	+		Ga0059261_1207	0.53	-1.4
1,261,013	+		Ga0059261_1207	0.53	+0.3
1,261,014	-		Ga0059261_1207	0.53	+0.5
1,261,133	+		Ga0059261_1207	0.63	-0.2
1,261,133	+		Ga0059261_1207	0.63	-0.5
1,261,133	+		Ga0059261_1207	0.63	+0.5
1,261,133	+		Ga0059261_1207	0.63	+0.7
1,261,133	+		Ga0059261_1207	0.63	-0.2
1,261,133	+		Ga0059261_1207	0.63	+0.2
1,261,133	+		Ga0059261_1207	0.63	+0.7
1,261,133	+		Ga0059261_1207	0.63	-0.3
1,261,133	+		Ga0059261_1207	0.63	+0.1
1,261,133	+		Ga0059261_1207	0.63	-0.0
1,261,133	+		Ga0059261_1207	0.63	+0.3
1,261,133	+		Ga0059261_1207	0.63	+0.0
1,261,133	+		Ga0059261_1207	0.63	-0.1
1,261,133	+				+0.9
1,261,133	+		Ga0059261_1207	0.63	-0.3
1,261,133	+		Ga0059261_1207	0.63	-0.5
1,261,133	+		Ga0059261_1207	0.63	+1.2
1,261,133	+		Ga0059261_1207	0.63	-0.3
1,261,133	+		Ga0059261_1207	0.63	-0.3
1,261,134	-		Ga0059261_1207	0.63	+0.1
1,261,134	-		Ga0059261_1207	0.63	+0.9
1,261,134	-		Ga0059261_1207	0.63	-0.3
1,261,134	-				-0.7
1,261,134	-		Ga0059261_1207	0.63	+0.1
1,261,134	-		Ga0059261_1207	0.63	+0.0
1,261,134	-		Ga0059261_1207	0.63	+0.3
1,261,134	-		Ga0059261_1207	0.63	+0.5
1,261,134	-		Ga0059261_1207	0.63	+0.6
1,261,134	-		Ga0059261_1207	0.63	-0.5
1,261,134	-		Ga0059261_1207	0.63	+0.5
1,261,134	-		Ga0059261_1207	0.63	-0.8
1,261,134	-		Ga0059261_1207	0.63	-0.2
1,261,260	-		Ga0059261_1207	0.74	+0.6
1,261,373	+		Ga0059261_1207	0.84	+0.8
1,261,374	-		Ga0059261_1207	0.84	+0.1
1,261,409	+		Ga0059261_1207	0.87	-0.1
1,261,410	-		Ga0059261_1207	0.87	-0.2
1,261,482	+				+0.4
1,261,483	-				+0.3
1,261,484	+				-1.4
1,261,484	+				-0.2
1,261,484	+				+0.1
1,261,484	+				+0.3
1,261,484	+				+0.9
1,261,484	+				+0.2
1,261,484	+				+0.5
1,261,484	+				-0.2
1,261,484	+				-0.4
1,261,484	+				+0.0
1,261,484	+				+0.2
1,261,484	+				-0.9
1,261,485	-				+0.6
1,261,485	-				-0.0
1,261,485	-				-0.4
1,261,485	-				-0.4
1,261,485	-				+0.3
1,261,485	-				+0.4
1,261,485	-				-0.1
1,261,485	-				+0.2
1,261,485	-				-0.4
1,261,485	-				-0.1
1,261,485	-				-0.7
1,261,485	-				-0.6
1,261,485	-				-0.9
1,261,485	-				+0.4
1,261,490	+				+0.1
1,261,490	+				-0.4
1,261,490	+				-0.9
1,261,491	-				+0.5
1,261,581	+				-0.4
1,261,581	+				-0.1
1,261,581	+				+0.2
1,261,582	-				+0.0
1,261,582	-				+0.5
1,261,719	+		Ga0059261_1208	0.26	+0.3
1,261,719	+		Ga0059261_1208	0.26	+0.1
1,261,719	+		Ga0059261_1208	0.26	-1.7
1,261,719	+		Ga0059261_1208	0.26	-0.2
1,261,720	-		Ga0059261_1208	0.26	+0.3
1,261,720	-		Ga0059261_1208	0.26	+0.7
1,261,752	+		Ga0059261_1208	0.31	+1.1
1,261,752	+		Ga0059261_1208	0.31	-0.0
1,261,753	-		Ga0059261_1208	0.31	+0.1
1,261,850	+		Ga0059261_1208	0.46	-1.8
1,261,851	-		Ga0059261_1208	0.47	+0.2
1,262,064	+		Ga0059261_1208	0.80	+0.1
1,262,064	+		Ga0059261_1208	0.80	-0.0
1,262,064	+		Ga0059261_1208	0.80	-0.0
1,262,065	-		Ga0059261_1208	0.80	+0.7
1,262,065	-		Ga0059261_1208	0.80	+1.9
1,262,194	+				+0.1
1,262,194	+				-0.7
1,262,194	+				+0.3
1,262,194	+				-1.1
1,262,194	+				+0.3
1,262,195	-				-0.2
1,262,195	-				-0.1
1,262,195	-				+1.0
1,262,195	-				-0.2
1,262,195	-				+0.1
1,262,195	-				+0.9
1,262,557	+		Ga0059261_1209	0.47	+0.3
1,262,557	+		Ga0059261_1209	0.47	+0.3
1,262,557	+		Ga0059261_1209	0.47	+0.9
1,262,557	+		Ga0059261_1209	0.47	+0.5
1,262,557	+		Ga0059261_1209	0.47	+0.7
1,262,557	+		Ga0059261_1209	0.47	-0.4
1,262,558	-		Ga0059261_1209	0.47	-0.6
1,262,558	-		Ga0059261_1209	0.47	-0.8
1,262,558	-		Ga0059261_1209	0.47	+0.3
1,262,558	-		Ga0059261_1209	0.47	-0.6
1,262,558	-		Ga0059261_1209	0.47	+1.0
1,262,558	-		Ga0059261_1209	0.47	-1.9
1,262,558	-		Ga0059261_1209	0.47	+0.7
1,262,559	+		Ga0059261_1209	0.47	+0.5
1,262,559	+		Ga0059261_1209	0.47	+0.3
1,262,559	+		Ga0059261_1209	0.47	-0.5
1,262,559	+		Ga0059261_1209	0.47	-0.1
1,262,559	+		Ga0059261_1209	0.47	+0.8
1,262,560	-		Ga0059261_1209	0.48	-0.5
1,262,560	-		Ga0059261_1209	0.48	+0.9
1,262,560	-		Ga0059261_1209	0.48	+0.1
1,262,595	+		Ga0059261_1209	0.52	-0.2
1,262,595	+		Ga0059261_1209	0.52	-0.2
1,262,596	-		Ga0059261_1209	0.53	-0.6
1,262,596	-		Ga0059261_1209	0.53	-0.4
1,262,596	-		Ga0059261_1209	0.53	+0.0
1,262,670	+		Ga0059261_1209	0.63	+1.4
1,262,670	+		Ga0059261_1209	0.63	-0.2
1,262,670	+		Ga0059261_1209	0.63	+0.0
1,262,671	-		Ga0059261_1209	0.63	-0.3
1,262,671	-		Ga0059261_1209	0.63	-0.2
1,262,671	-		Ga0059261_1209	0.63	+0.0
1,262,671	-		Ga0059261_1209	0.63	+0.1
1,262,671	-		Ga0059261_1209	0.63	-2.1
1,262,694	+		Ga0059261_1209	0.66	+0.4
1,262,694	+		Ga0059261_1209	0.66	+0.4
1,262,736	+		Ga0059261_1209	0.72	+0.2
1,262,736	+		Ga0059261_1209	0.72	+0.1
1,262,737	-				+1.9
1,262,737	-				+0.9
1,262,737	-		Ga0059261_1209	0.72	+0.4
1,262,766	+		Ga0059261_1209	0.76	-0.2
1,262,766	+				+0.3
1,262,767	-		Ga0059261_1209	0.76	+0.3
1,262,767	-		Ga0059261_1209	0.76	+1.5
1,262,806	+				+0.3
1,262,807	-		Ga0059261_1209	0.81	-0.6
1,262,808	+		Ga0059261_1209	0.82	+0.1
1,262,808	+		Ga0059261_1209	0.82	+0.0
1,262,808	+		Ga0059261_1209	0.82	+0.2
1,262,808	+				+1.3
1,262,808	+		Ga0059261_1209	0.82	-1.0
1,262,808	+		Ga0059261_1209	0.82	-0.0
1,262,808	+		Ga0059261_1209	0.82	+0.8
1,262,808	+		Ga0059261_1209	0.82	-1.0
1,262,809	-		Ga0059261_1209	0.82	+0.2
1,262,809	-		Ga0059261_1209	0.82	-0.4
1,262,809	-		Ga0059261_1209	0.82	-0.1
1,262,809	-		Ga0059261_1209	0.82	+0.2
1,262,809	-		Ga0059261_1209	0.82	-0.0
1,262,809	-		Ga0059261_1209	0.82	-0.9
1,263,056	+				+0.9
1,263,057	-				-0.1
1,263,057	-				+0.0
1,263,076	+				-0.0
1,263,077	-				-0.8