Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01543

Experiment: PYE with Benzethonium chloride 0.001 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Benzethonium chloride 0.001 mM
1,652,546	+		CCNA_01542	0.60	+1.0
1,652,547	-		CCNA_01542	0.60	-1.1
1,652,547	-		CCNA_01542	0.60	-1.1
1,652,552	-		CCNA_01542	0.60	-0.3
1,652,586	-		CCNA_01542	0.62	+1.5
1,652,586	-		CCNA_01542	0.62	-1.1
1,652,593	+		CCNA_01542	0.62	-0.9
1,652,626	+		CCNA_01542	0.63	+0.3
1,652,634	-		CCNA_01542	0.64	-1.9
1,652,635	-		CCNA_01542	0.64	+0.2
1,652,640	-		CCNA_01542	0.64	+0.3
1,652,652	+		CCNA_01542	0.65	-0.8
1,652,659	+		CCNA_01542	0.65	-1.3
1,652,690	+		CCNA_01542	0.66	+0.5
1,652,690	+		CCNA_01542	0.66	-1.9
1,652,698	-		CCNA_01542	0.67	-0.5
1,652,698	-		CCNA_01542	0.67	-0.2
1,652,760	+		CCNA_01542	0.69	+0.7
1,652,768	-		CCNA_01542	0.70	+0.5
1,652,768	-		CCNA_01542	0.70	+0.9
1,652,773	-		CCNA_01542	0.70	+0.9
1,652,775	-		CCNA_01542	0.70	+0.3
1,652,775	-		CCNA_01542	0.70	+2.4
1,652,787	-		CCNA_01542	0.71	-0.0
1,652,824	+		CCNA_01542	0.72	-0.5
1,652,824	+		CCNA_01542	0.72	+0.7
1,652,832	-		CCNA_01542	0.73	-0.4
1,652,832	-		CCNA_01542	0.73	-0.2
1,652,832	-		CCNA_01542	0.73	+0.1
1,652,836	+		CCNA_01542	0.73	-0.9
1,652,872	+		CCNA_01542	0.74	+0.3
1,652,880	-		CCNA_01542	0.75	-1.8
1,652,882	+		CCNA_01542	0.75	+0.6
1,652,884	+		CCNA_01542	0.75	-0.1
1,652,884	+		CCNA_01542	0.75	-0.0
1,652,890	-		CCNA_01542	0.75	-1.4
1,652,890	-		CCNA_01542	0.75	+0.9
1,652,890	-		CCNA_01542	0.75	-0.8
1,652,890	-		CCNA_01542	0.75	-0.8
1,652,890	-		CCNA_01542	0.75	+0.5
1,652,892	-		CCNA_01542	0.75	+0.5
1,652,950	-		CCNA_01542	0.78	+0.3
1,652,983	+		CCNA_01542	0.79	-0.8
1,653,001	-		CCNA_01542	0.80	+0.5
1,653,031	+		CCNA_01542	0.81	+1.0
1,653,031	+		CCNA_01542	0.81	+2.0
1,653,039	-		CCNA_01542	0.82	-0.1
1,653,039	-		CCNA_01542	0.82	+1.2
1,653,050	+		CCNA_01542	0.82	+1.3
1,653,069	+		CCNA_01542	0.83	-0.5
1,653,089	-		CCNA_01542	0.84	+1.0
1,653,127	+		CCNA_01542	0.86	+1.3
1,653,157	+		CCNA_01542	0.87	+0.7
1,653,167	+		CCNA_01542	0.87	+0.3
1,653,172	+		CCNA_01542	0.87	-0.7
1,653,184	+		CCNA_01542	0.88	+0.3
1,653,192	-		CCNA_01542	0.88	-0.2
1,653,192	-		CCNA_01542	0.88	+1.2
1,653,192	-		CCNA_01542	0.88	-0.0
1,653,192	-		CCNA_01542	0.88	-1.0
1,653,192	-		CCNA_01542	0.88	-2.0
1,653,192	-		CCNA_01542	0.88	+0.3
1,653,192	-		CCNA_01542	0.88	+0.7
1,653,207	+		CCNA_01542	0.89	-1.5
1,653,274	+				-0.5
1,653,282	-				-0.1
1,653,282	-				-0.8
1,653,298	+				+0.7
1,653,298	+				+1.3
1,653,306	-				+0.5
1,653,306	-				+0.3
1,653,336	+				+1.3
1,653,354	-				-1.4
1,653,354	-				+0.6
1,653,393	+				-0.2
1,653,393	+				-1.0
1,653,393	+				+2.9
1,653,393	+				+0.1
1,653,401	-				+0.1
1,653,401	-				-1.3
1,653,431	-				+1.1
1,653,452	+				-0.0
1,653,504	-				-0.6
1,653,510	-				-0.8
1,653,542	+				-1.3
1,653,550	-				-1.0
1,653,550	-				+0.1
1,653,550	-				+0.7
1,653,550	-				+0.5
1,653,550	-				+0.9
1,653,598	-				+2.6
1,653,601	+				+1.3
1,653,601	+				-1.0
1,653,604	-				+1.1
1,653,609	-				-0.0
1,653,662	+				+0.8
1,653,743	+		CCNA_01543	0.15	-1.0
1,653,748	+		CCNA_01543	0.15	-0.0
1,653,749	+		CCNA_01543	0.15	+0.6
1,653,756	-		CCNA_01543	0.16	+0.0
1,653,757	-		CCNA_01543	0.16	+0.1
1,653,757	-		CCNA_01543	0.16	+1.1
1,653,787	+		CCNA_01543	0.18	-1.6
1,653,787	+		CCNA_01543	0.18	-0.9
1,653,806	-		CCNA_01543	0.19	+1.0
1,653,868	-		CCNA_01543	0.24	+1.9
1,653,896	+		CCNA_01543	0.26	-0.7
1,653,899	-		CCNA_01543	0.26	+1.8
1,653,904	-		CCNA_01543	0.27	+1.3
1,653,925	-		CCNA_01543	0.28	+0.4
1,653,925	-		CCNA_01543	0.28	-0.0
1,653,929	+		CCNA_01543	0.29	+1.3
1,653,937	-		CCNA_01543	0.29	+3.0
1,653,956	-		CCNA_01543	0.31	+0.6
1,653,984	+		CCNA_01543	0.33	+1.8
1,654,018	+		CCNA_01543	0.35	-0.0
1,654,045	+		CCNA_01543	0.37	+1.3
1,654,068	+		CCNA_01543	0.39	-0.3
1,654,102	-		CCNA_01543	0.42	+0.3
1,654,102	-		CCNA_01543	0.42	+0.6
1,654,119	+		CCNA_01543	0.43	+0.6
1,654,119	+		CCNA_01543	0.43	-2.3
1,654,127	-		CCNA_01543	0.43	+0.4
1,654,129	+		CCNA_01543	0.44	+1.5
1,654,129	+		CCNA_01543	0.44	+0.6
1,654,137	-		CCNA_01543	0.44	-0.2
1,654,137	-		CCNA_01543	0.44	+2.9
1,654,209	+		CCNA_01543	0.50	-0.9
1,654,259	-		CCNA_01543	0.53	+1.3
1,654,291	+		CCNA_01543	0.56	-0.3
1,654,345	+		CCNA_01543	0.60	-0.0
1,654,345	+		CCNA_01543	0.60	+1.3
1,654,353	-		CCNA_01543	0.60	+0.9
1,654,353	-		CCNA_01543	0.60	+1.3
1,654,353	-		CCNA_01543	0.60	+2.2
1,654,404	+		CCNA_01543	0.64	-0.5
1,654,411	-		CCNA_01543	0.65	-0.1
1,654,484	-		CCNA_01543	0.70	+0.4
1,654,487	-		CCNA_01543	0.70	+0.6
1,654,645	-		CCNA_01543	0.82	+2.1
1,654,645	-		CCNA_01543	0.82	-0.2
1,654,667	+		CCNA_01543	0.84	-0.3
1,654,668	+		CCNA_01543	0.84	-1.9
1,654,675	-		CCNA_01543	0.84	+2.5
1,654,713	-		CCNA_01543	0.87	-0.0
1,654,781	+				-0.3
1,654,784	-				+0.5
1,654,806	-				-0.6
1,654,817	+				-1.8
1,654,821	-				-0.6
1,654,833	-				-0.7
1,654,840	-				+0.4
1,654,925	-				+2.0
1,654,933	-				+2.7
1,654,983	+				+1.7
1,654,991	-				+0.3
1,655,065	-				-0.0
1,655,086	+				-0.8
1,655,123	+				-1.6
1,655,123	+				+0.8
1,655,148	-				-0.7
1,655,185	+		CCNA_01545	0.12	-1.2
1,655,195	+		CCNA_01545	0.13	+0.9
1,655,289	+		CCNA_01545	0.21	-1.3
1,655,320	+		CCNA_01545	0.24	+1.1
1,655,373	-		CCNA_01545	0.28	-0.0
1,655,416	+		CCNA_01545	0.32	+1.7
1,655,425	-		CCNA_01545	0.33	+0.3
1,655,440	+		CCNA_01545	0.34	+0.7
1,655,475	+		CCNA_01545	0.37	+0.9
1,655,549	+		CCNA_01545	0.43	-1.6
1,655,549	+		CCNA_01545	0.43	-2.2
1,655,549	+		CCNA_01545	0.43	-0.5
1,655,549	+		CCNA_01545	0.43	+0.6
1,655,549	+		CCNA_01545	0.43	-0.0
1,655,549	+		CCNA_01545	0.43	-0.9
1,655,549	+		CCNA_01545	0.43	-0.3
1,655,550	+		CCNA_01545	0.43	+0.3
1,655,557	-		CCNA_01545	0.44	-0.9
1,655,557	-		CCNA_01545	0.44	-1.2
1,655,557	-		CCNA_01545	0.44	-0.0
1,655,557	-		CCNA_01545	0.44	+0.7
1,655,586	+		CCNA_01545	0.46	+0.2
1,655,591	+		CCNA_01545	0.47	+0.7
1,655,594	-		CCNA_01545	0.47	-1.4
1,655,594	-		CCNA_01545	0.47	-2.8
1,655,615	+		CCNA_01545	0.49	+1.6
1,655,623	-		CCNA_01545	0.49	+0.3
1,655,692	+		CCNA_01545	0.55	-0.9
1,655,722	-		CCNA_01545	0.58	-0.5
1,655,791	+		CCNA_01545	0.64	-0.3
1,655,831	+		CCNA_01545	0.67	+0.3
1,655,841	-		CCNA_01545	0.68	+2.3
1,655,879	+		CCNA_01545	0.71	+0.9