Experiment: outer cut, LB soft agar motility assay
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS33640 and AZOBR_RS33645 are separated by 445 nucleotides
AZOBR_RS33640: AZOBR_RS33640 - Fe-S osidoreductase, at 72,715 to 74,037
_RS33640
AZOBR_RS33645: AZOBR_RS33645 - hypothetical protein, at 74,483 to 76,876
_RS33645
Position (kb) 74
75
76
77 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 73.510 kb on + strand, within AZOBR_RS33640 at 73.528 kb on + strand, within AZOBR_RS33640 at 73.528 kb on + strand, within AZOBR_RS33640 at 73.529 kb on - strand, within AZOBR_RS33640 at 73.819 kb on + strand, within AZOBR_RS33640 at 73.820 kb on - strand, within AZOBR_RS33640 at 73.867 kb on + strand, within AZOBR_RS33640 at 73.996 kb on + strand at 73.996 kb on + strand at 73.997 kb on - strand at 73.997 kb on - strand at 73.997 kb on - strand at 73.997 kb on - strand at 74.002 kb on + strand at 74.002 kb on + strand at 74.002 kb on + strand at 74.003 kb on - strand at 74.003 kb on - strand at 74.003 kb on - strand at 74.090 kb on - strand at 74.090 kb on - strand at 74.446 kb on + strand at 74.447 kb on - strand at 75.084 kb on + strand, within AZOBR_RS33645 at 75.085 kb on - strand, within AZOBR_RS33645 at 75.085 kb on - strand, within AZOBR_RS33645 at 75.267 kb on + strand, within AZOBR_RS33645 at 75.267 kb on + strand, within AZOBR_RS33645 at 75.267 kb on + strand, within AZOBR_RS33645 at 75.267 kb on + strand, within AZOBR_RS33645 at 75.268 kb on - strand, within AZOBR_RS33645 at 75.847 kb on - strand, within AZOBR_RS33645 at 75.847 kb on - strand, within AZOBR_RS33645 at 75.847 kb on - strand, within AZOBR_RS33645 at 76.251 kb on + strand, within AZOBR_RS33645 at 76.252 kb on - strand, within AZOBR_RS33645 at 76.500 kb on + strand, within AZOBR_RS33645 at 76.500 kb on + strand, within AZOBR_RS33645 at 76.509 kb on + strand, within AZOBR_RS33645 at 76.570 kb on - strand, within AZOBR_RS33645 at 76.587 kb on + strand, within AZOBR_RS33645 at 76.587 kb on + strand, within AZOBR_RS33645 at 76.588 kb on - strand, within AZOBR_RS33645 at 76.588 kb on - strand, within AZOBR_RS33645 at 76.588 kb on - strand, within AZOBR_RS33645 at 76.588 kb on - strand, within AZOBR_RS33645 at 76.920 kb on - strand at 76.923 kb on + strand at 76.924 kb on - strand at 76.924 kb on - strand at 76.924 kb on - strand at 77.027 kb on + strand at 77.027 kb on + strand at 77.311 kb on - strand at 77.311 kb on - strand at 77.311 kb on - strand at 77.412 kb on + strand at 77.413 kb on - strand at 77.413 kb on - strand at 77.442 kb on - strand at 77.467 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction outer cut, LB soft agar motility assay remove 73,510 + AZOBR_RS33640 0.60 +0.4 73,528 + AZOBR_RS33640 0.61 +0.3 73,528 + AZOBR_RS33640 0.61 -2.0 73,529 - AZOBR_RS33640 0.62 -1.8 73,819 + AZOBR_RS33640 0.83 +0.4 73,820 - AZOBR_RS33640 0.84 -1.9 73,867 + AZOBR_RS33640 0.87 -0.2 73,996 + -3.6 73,996 + -2.6 73,997 - -1.5 73,997 - -3.0 73,997 - -1.6 73,997 - -2.6 74,002 + -1.1 74,002 + -0.6 74,002 + -2.2 74,003 - -3.2 74,003 - -3.4 74,003 - +1.4 74,090 - -0.5 74,090 - -0.9 74,446 + -2.0 74,447 - +0.6 75,084 + AZOBR_RS33645 0.25 -2.7 75,085 - AZOBR_RS33645 0.25 -1.2 75,085 - AZOBR_RS33645 0.25 -0.1 75,267 + AZOBR_RS33645 0.33 -1.2 75,267 + AZOBR_RS33645 0.33 +0.1 75,267 + AZOBR_RS33645 0.33 -1.8 75,267 + AZOBR_RS33645 0.33 -1.6 75,268 - AZOBR_RS33645 0.33 -2.8 75,847 - AZOBR_RS33645 0.57 -0.7 75,847 - AZOBR_RS33645 0.57 -0.1 75,847 - AZOBR_RS33645 0.57 -0.6 76,251 + AZOBR_RS33645 0.74 -1.4 76,252 - AZOBR_RS33645 0.74 -2.3 76,500 + AZOBR_RS33645 0.84 -1.2 76,500 + AZOBR_RS33645 0.84 -2.4 76,509 + AZOBR_RS33645 0.85 -0.4 76,570 - AZOBR_RS33645 0.87 +0.4 76,587 + AZOBR_RS33645 0.88 -4.2 76,587 + AZOBR_RS33645 0.88 -0.7 76,588 - AZOBR_RS33645 0.88 -1.1 76,588 - AZOBR_RS33645 0.88 -1.2 76,588 - AZOBR_RS33645 0.88 -0.2 76,588 - AZOBR_RS33645 0.88 -0.3 76,920 - +1.3 76,923 + -0.8 76,924 - +0.8 76,924 - -0.5 76,924 - +4.2 77,027 + +0.8 77,027 + -0.5 77,311 - +1.0 77,311 - -4.3 77,311 - +1.6 77,412 + -0.7 77,413 - -2.5 77,413 - +0.0 77,442 - +1.2 77,467 - -1.2
Or see this region's nucleotide sequence