Experiment: outer cut, LB soft agar motility assay
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS25460 and AZOBR_RS25465 are separated by 18 nucleotides
AZOBR_RS25460: AZOBR_RS25460 - sarcosine oxidase subunit delta, at 766,407 to 766,688
_RS25460
AZOBR_RS25465: AZOBR_RS25465 - sarcosine oxidase subunit beta, at 766,707 to 767,957
_RS25465
Position (kb) 766
767 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 765.485 kb on + strand at 765.486 kb on - strand at 765.486 kb on - strand at 765.989 kb on + strand at 766.028 kb on + strand at 766.028 kb on + strand at 766.032 kb on - strand at 766.032 kb on - strand at 766.326 kb on - strand at 766.326 kb on - strand at 766.507 kb on + strand, within AZOBR_RS25460 at 766.508 kb on - strand, within AZOBR_RS25460 at 766.508 kb on - strand, within AZOBR_RS25460 at 766.558 kb on + strand, within AZOBR_RS25460 at 766.558 kb on + strand, within AZOBR_RS25460 at 766.558 kb on + strand, within AZOBR_RS25460 at 766.559 kb on - strand, within AZOBR_RS25460 at 766.564 kb on + strand, within AZOBR_RS25460 at 766.564 kb on + strand, within AZOBR_RS25460 at 766.564 kb on + strand, within AZOBR_RS25460 at 766.565 kb on - strand, within AZOBR_RS25460 at 767.047 kb on + strand, within AZOBR_RS25465 at 767.048 kb on - strand, within AZOBR_RS25465 at 767.056 kb on + strand, within AZOBR_RS25465 at 767.056 kb on + strand, within AZOBR_RS25465 at 767.056 kb on + strand, within AZOBR_RS25465 at 767.056 kb on + strand, within AZOBR_RS25465 at 767.056 kb on + strand, within AZOBR_RS25465 at 767.057 kb on - strand, within AZOBR_RS25465 at 767.057 kb on - strand, within AZOBR_RS25465 at 767.057 kb on - strand, within AZOBR_RS25465 at 767.057 kb on - strand, within AZOBR_RS25465 at 767.111 kb on - strand, within AZOBR_RS25465 at 767.188 kb on + strand, within AZOBR_RS25465 at 767.188 kb on + strand, within AZOBR_RS25465 at 767.188 kb on + strand, within AZOBR_RS25465 at 767.189 kb on - strand, within AZOBR_RS25465 at 767.680 kb on + strand, within AZOBR_RS25465
Per-strain Table
Position Strand Gene LocusTag Fraction outer cut, LB soft agar motility assay remove 765,485 + +0.0 765,486 - -1.5 765,486 - -0.1 765,989 + +2.5 766,028 + +0.7 766,028 + +2.2 766,032 - +0.7 766,032 - +0.4 766,326 - -0.3 766,326 - -2.7 766,507 + AZOBR_RS25460 0.35 +1.3 766,508 - AZOBR_RS25460 0.36 -0.5 766,508 - AZOBR_RS25460 0.36 -0.5 766,558 + AZOBR_RS25460 0.54 -1.9 766,558 + AZOBR_RS25460 0.54 +0.3 766,558 + AZOBR_RS25460 0.54 -1.1 766,559 - AZOBR_RS25460 0.54 -0.2 766,564 + AZOBR_RS25460 0.56 -0.1 766,564 + AZOBR_RS25460 0.56 -1.3 766,564 + AZOBR_RS25460 0.56 +0.4 766,565 - AZOBR_RS25460 0.56 -0.6 767,047 + AZOBR_RS25465 0.27 -1.0 767,048 - AZOBR_RS25465 0.27 +0.8 767,056 + AZOBR_RS25465 0.28 -4.3 767,056 + AZOBR_RS25465 0.28 -0.4 767,056 + AZOBR_RS25465 0.28 -2.5 767,056 + AZOBR_RS25465 0.28 +2.3 767,056 + AZOBR_RS25465 0.28 -3.4 767,057 - AZOBR_RS25465 0.28 -0.5 767,057 - AZOBR_RS25465 0.28 -0.7 767,057 - AZOBR_RS25465 0.28 -2.2 767,057 - AZOBR_RS25465 0.28 -0.4 767,111 - AZOBR_RS25465 0.32 -0.2 767,188 + AZOBR_RS25465 0.38 -0.6 767,188 + AZOBR_RS25465 0.38 +2.5 767,188 + AZOBR_RS25465 0.38 -2.7 767,189 - AZOBR_RS25465 0.39 -1.9 767,680 + AZOBR_RS25465 0.78 -2.5
Or see this region's nucleotide sequence