Experiment: outer cut, LB soft agar motility assay
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS23310 and AZOBR_RS23315 are separated by 53 nucleotides AZOBR_RS23315 and AZOBR_RS23320 overlap by 7 nucleotides AZOBR_RS23320 and AZOBR_RS23325 are separated by 466 nucleotides
AZOBR_RS23310: AZOBR_RS23310 - hypothetical protein, at 255,402 to 256,379
_RS23310
AZOBR_RS23315: AZOBR_RS23315 - conserved membrane protein of unknown function, at 256,433 to 256,918
_RS23315
AZOBR_RS23320: AZOBR_RS23320 - C4-dicarboxylate ABC transporter permease, at 256,912 to 258,414
_RS23320
AZOBR_RS23325: AZOBR_RS23325 - RNA polymerase sigma70, at 258,881 to 259,414
_RS23325
Position (kb) 256
257
258
259 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 256.252 kb on - strand, within AZOBR_RS23310 at 256.252 kb on - strand, within AZOBR_RS23310 at 256.291 kb on - strand at 256.496 kb on + strand, within AZOBR_RS23315 at 256.709 kb on + strand, within AZOBR_RS23315 at 256.709 kb on + strand, within AZOBR_RS23315 at 256.710 kb on - strand, within AZOBR_RS23315 at 256.710 kb on - strand, within AZOBR_RS23315 at 256.867 kb on - strand, within AZOBR_RS23315 at 256.867 kb on - strand, within AZOBR_RS23315 at 256.867 kb on - strand, within AZOBR_RS23315 at 256.911 kb on + strand at 256.911 kb on + strand at 256.912 kb on - strand at 256.922 kb on + strand at 256.987 kb on + strand at 256.987 kb on + strand at 256.987 kb on + strand at 256.987 kb on + strand at 256.987 kb on + strand at 256.987 kb on + strand at 256.987 kb on + strand at 256.988 kb on - strand at 257.179 kb on + strand, within AZOBR_RS23320 at 257.179 kb on + strand, within AZOBR_RS23320 at 257.179 kb on + strand, within AZOBR_RS23320 at 257.743 kb on + strand, within AZOBR_RS23320 at 257.743 kb on + strand, within AZOBR_RS23320 at 257.744 kb on - strand, within AZOBR_RS23320 at 257.744 kb on - strand, within AZOBR_RS23320 at 257.744 kb on - strand, within AZOBR_RS23320 at 257.854 kb on + strand, within AZOBR_RS23320 at 257.854 kb on + strand, within AZOBR_RS23320 at 257.854 kb on + strand, within AZOBR_RS23320 at 257.854 kb on + strand, within AZOBR_RS23320 at 257.854 kb on + strand, within AZOBR_RS23320 at 257.854 kb on + strand, within AZOBR_RS23320 at 257.854 kb on + strand, within AZOBR_RS23320 at 257.854 kb on + strand, within AZOBR_RS23320 at 257.855 kb on - strand, within AZOBR_RS23320 at 257.855 kb on - strand, within AZOBR_RS23320 at 257.855 kb on - strand, within AZOBR_RS23320 at 257.855 kb on - strand, within AZOBR_RS23320 at 257.855 kb on - strand, within AZOBR_RS23320 at 257.855 kb on - strand, within AZOBR_RS23320 at 257.855 kb on - strand, within AZOBR_RS23320 at 257.855 kb on - strand, within AZOBR_RS23320 at 257.977 kb on + strand, within AZOBR_RS23320 at 257.978 kb on - strand, within AZOBR_RS23320 at 258.080 kb on - strand, within AZOBR_RS23320 at 258.182 kb on - strand, within AZOBR_RS23320 at 258.496 kb on + strand at 258.830 kb on - strand at 259.227 kb on + strand, within AZOBR_RS23325
Per-strain Table
Position Strand Gene LocusTag Fraction outer cut, LB soft agar motility assay remove 256,252 - AZOBR_RS23310 0.87 -2.0 256,252 - AZOBR_RS23310 0.87 +1.5 256,291 - -0.1 256,496 + AZOBR_RS23315 0.13 +1.0 256,709 + AZOBR_RS23315 0.57 -1.1 256,709 + AZOBR_RS23315 0.57 -2.4 256,710 - AZOBR_RS23315 0.57 +0.7 256,710 - AZOBR_RS23315 0.57 -1.1 256,867 - AZOBR_RS23315 0.89 +1.2 256,867 - AZOBR_RS23315 0.89 -0.1 256,867 - AZOBR_RS23315 0.89 -0.4 256,911 + -0.8 256,911 + +3.0 256,912 - -0.1 256,922 + -3.6 256,987 + +0.6 256,987 + +0.9 256,987 + -3.1 256,987 + -0.6 256,987 + -1.6 256,987 + -0.1 256,987 + -0.5 256,988 - -1.5 257,179 + AZOBR_RS23320 0.18 -0.6 257,179 + AZOBR_RS23320 0.18 -0.9 257,179 + AZOBR_RS23320 0.18 -0.7 257,743 + AZOBR_RS23320 0.55 +0.6 257,743 + AZOBR_RS23320 0.55 -1.4 257,744 - AZOBR_RS23320 0.55 -1.0 257,744 - AZOBR_RS23320 0.55 -0.6 257,744 - AZOBR_RS23320 0.55 -1.2 257,854 + AZOBR_RS23320 0.63 -2.1 257,854 + AZOBR_RS23320 0.63 -2.8 257,854 + AZOBR_RS23320 0.63 -1.7 257,854 + AZOBR_RS23320 0.63 -1.5 257,854 + AZOBR_RS23320 0.63 -4.1 257,854 + AZOBR_RS23320 0.63 +0.7 257,854 + AZOBR_RS23320 0.63 +0.3 257,854 + AZOBR_RS23320 0.63 -0.5 257,855 - AZOBR_RS23320 0.63 -1.1 257,855 - AZOBR_RS23320 0.63 -0.4 257,855 - AZOBR_RS23320 0.63 +2.9 257,855 - AZOBR_RS23320 0.63 -0.0 257,855 - AZOBR_RS23320 0.63 -0.9 257,855 - AZOBR_RS23320 0.63 +0.9 257,855 - AZOBR_RS23320 0.63 -0.4 257,855 - AZOBR_RS23320 0.63 -2.7 257,977 + AZOBR_RS23320 0.71 -0.2 257,978 - AZOBR_RS23320 0.71 +0.1 258,080 - AZOBR_RS23320 0.78 -0.6 258,182 - AZOBR_RS23320 0.84 +0.3 258,496 + -0.6 258,830 - -0.0 259,227 + AZOBR_RS23325 0.65 -0.4
Or see this region's nucleotide sequence