Experiment: outer cut, LB soft agar motility assay
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS18145 and AZOBR_RS18150 overlap by 19 nucleotides
AZOBR_RS18145: AZOBR_RS18145 - racemase, at 828,608 to 829,855
_RS18145
AZOBR_RS18150: AZOBR_RS18150 - membrane protein, at 829,837 to 830,988
_RS18150
Position (kb) 828
829
830 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 827.671 kb on + strand at 827.672 kb on - strand at 828.242 kb on + strand at 828.639 kb on - strand at 828.909 kb on - strand, within AZOBR_RS18145 at 828.909 kb on - strand, within AZOBR_RS18145 at 828.944 kb on + strand, within AZOBR_RS18145 at 828.945 kb on - strand, within AZOBR_RS18145 at 828.980 kb on + strand, within AZOBR_RS18145 at 829.016 kb on + strand, within AZOBR_RS18145 at 829.017 kb on - strand, within AZOBR_RS18145 at 829.115 kb on + strand, within AZOBR_RS18145 at 829.116 kb on - strand, within AZOBR_RS18145 at 829.139 kb on + strand, within AZOBR_RS18145 at 829.316 kb on + strand, within AZOBR_RS18145 at 829.317 kb on - strand, within AZOBR_RS18145 at 829.317 kb on - strand, within AZOBR_RS18145 at 829.560 kb on - strand, within AZOBR_RS18145 at 829.560 kb on - strand, within AZOBR_RS18145 at 829.560 kb on - strand, within AZOBR_RS18145 at 829.619 kb on + strand, within AZOBR_RS18145 at 829.620 kb on - strand, within AZOBR_RS18145 at 829.876 kb on + strand at 829.877 kb on - strand at 830.138 kb on - strand, within AZOBR_RS18150 at 830.522 kb on - strand, within AZOBR_RS18150 at 830.522 kb on - strand, within AZOBR_RS18150 at 830.530 kb on + strand, within AZOBR_RS18150 at 830.531 kb on - strand, within AZOBR_RS18150 at 830.797 kb on + strand, within AZOBR_RS18150 at 830.830 kb on + strand, within AZOBR_RS18150 at 830.830 kb on + strand, within AZOBR_RS18150 at 830.855 kb on - strand, within AZOBR_RS18150 at 830.855 kb on - strand, within AZOBR_RS18150 at 830.855 kb on - strand, within AZOBR_RS18150
Per-strain Table
Position Strand Gene LocusTag Fraction outer cut, LB soft agar motility assay remove 827,671 + -0.2 827,672 - +2.4 828,242 + -0.4 828,639 - +1.0 828,909 - AZOBR_RS18145 0.24 -1.8 828,909 - AZOBR_RS18145 0.24 +1.5 828,944 + AZOBR_RS18145 0.27 +1.0 828,945 - AZOBR_RS18145 0.27 -2.0 828,980 + AZOBR_RS18145 0.30 -1.1 829,016 + AZOBR_RS18145 0.33 -3.6 829,017 - AZOBR_RS18145 0.33 -0.6 829,115 + AZOBR_RS18145 0.41 +0.6 829,116 - AZOBR_RS18145 0.41 -1.1 829,139 + AZOBR_RS18145 0.43 +0.9 829,316 + AZOBR_RS18145 0.57 +2.0 829,317 - AZOBR_RS18145 0.57 +0.9 829,317 - AZOBR_RS18145 0.57 +1.6 829,560 - AZOBR_RS18145 0.76 -0.5 829,560 - AZOBR_RS18145 0.76 -0.2 829,560 - AZOBR_RS18145 0.76 +1.0 829,619 + AZOBR_RS18145 0.81 +0.3 829,620 - AZOBR_RS18145 0.81 +0.4 829,876 + -2.8 829,877 - -2.5 830,138 - AZOBR_RS18150 0.26 +0.7 830,522 - AZOBR_RS18150 0.59 +0.5 830,522 - AZOBR_RS18150 0.59 -0.4 830,530 + AZOBR_RS18150 0.60 -2.5 830,531 - AZOBR_RS18150 0.60 -3.5 830,797 + AZOBR_RS18150 0.83 -1.0 830,830 + AZOBR_RS18150 0.86 -0.9 830,830 + AZOBR_RS18150 0.86 -1.4 830,855 - AZOBR_RS18150 0.88 +1.8 830,855 - AZOBR_RS18150 0.88 -0.5 830,855 - AZOBR_RS18150 0.88 -1.9
Or see this region's nucleotide sequence