Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_27970
Experiment: Fusidic 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fusidic 0.1 mg/ml |
---|---|---|---|---|---|
remove | |||||
6,384,186 | + | AO356_27965 | 0.54 | +0.2 | |
6,384,187 | - | AO356_27965 | 0.54 | -0.6 | |
6,384,866 | + | +0.6 | |||
6,384,866 | + | -0.9 | |||
6,384,866 | + | -0.1 | |||
6,384,866 | + | +0.1 | |||
6,384,867 | - | -0.5 | |||
6,384,867 | - | -0.2 | |||
6,385,094 | + | -0.8 | |||
6,385,095 | - | +0.8 | |||
6,385,095 | - | +3.1 | |||
6,385,101 | + | -0.1 | |||
6,385,156 | - | +0.3 | |||
6,385,156 | - | +0.0 | |||
6,385,299 | + | +0.7 | |||
6,385,299 | + | +0.6 | |||
6,385,577 | - | AO356_27970 | 0.24 | -0.0 | |
6,385,676 | - | AO356_27970 | 0.30 | -0.6 | |
6,385,816 | + | AO356_27970 | 0.38 | -0.6 | |
6,386,143 | + | AO356_27970 | 0.56 | -1.0 | |
6,386,144 | - | AO356_27970 | 0.56 | -1.3 | |
6,386,389 | + | AO356_27970 | 0.70 | -0.5 | |
6,386,447 | + | AO356_27970 | 0.73 | -0.3 | |
6,386,447 | + | AO356_27970 | 0.73 | +1.8 | |
6,386,448 | - | AO356_27970 | 0.73 | -0.2 | |
6,386,448 | - | AO356_27970 | 0.73 | +0.5 | |
6,386,448 | - | AO356_27970 | 0.73 | -0.4 | |
6,386,534 | + | AO356_27970 | 0.78 | -1.0 | |
6,386,535 | - | AO356_27970 | 0.78 | +0.0 | |
6,386,535 | - | AO356_27970 | 0.78 | +0.1 | |
6,387,011 | + | -0.3 | |||
6,387,021 | - | -0.2 |
Or see this region's nucleotide sequence